RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 EIF3MQ7L2H7 374 aaKnown RBP10.78□□□□□ -0.68
CAPN1-223ENST00000533079 MIER2Q8N344 545 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ZNF563Q8TA94 476 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ARL5BQ96KC2 179 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 PPP1R36Q96LQ0 422 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ANKRD27Q96NW4 1050 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 SDF2Q99470 211 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 NAA11Q9BSU3 229 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-223ENST00000533079 PIF1Q9H611 641 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 AIG1Q9NVV5 245 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ZIM2Q9NZV7 527 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 TMEM181Q9P2C4 612 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 PCDHGB4Q9UN71 923 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 SLC35A3Q9Y2D2 325 aa10.78□□□□□ -0.68
CAPN1-223ENST00000533079 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.68
CAPN1-223ENST00000533079 DUXAA6NLW8 204 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 LSM1O15116 133 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 TMPRSS2O15393 492 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 STX11O75558 287 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 CYP7B1O75881 506 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 NPPAP01160 153 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 IGLV1-44P01699 117 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 MSMBP08118 114 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 UBTFL6P0CB48 400 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 EPHA1P21709 976 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 HTR3AP46098 478 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 MAP2K6P52564 334 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 RPL38P63173 70 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SLC35A1P78382 337 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 TRIP10Q15642 601 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 TBRG1Q3YBR2 411 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SPDYE7PQ495Y7 208 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SPATS1Q496A3 300 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 HIKESHIQ53FT3 197 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 VHLLQ6RSH7 139 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 PAQR6Q6TCH4 344 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SNX32Q86XE0 403 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 CCDC103Q8IW40 242 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 PGAM4Q8N0Y7 254 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 LRRC17Q8N6Y2 441 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 POU5F2Q8N7G0 328 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 OR51F2Q8NH61 342 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 MAGEE2Q8TD90 523 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 OR5P2Q8WZ92 322 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 PMM1Q92871 262 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 DDIT4LQ96D03 193 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 OR7D2Q96RA2 312 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF747Q9BV97 191 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SF3B5Q9BWJ5 86 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 SUCNR1Q9BXA5 334 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 EXOSC3Q9NQT5 275 aaKnown RBP10.77□□□□□ -0.69
CAPN1-223ENST00000533079 ATAD3AQ9NVI7 634 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 ATP6V1HQ9UI12 483 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 NDUFAF1Q9Y375 327 aa10.77□□□□□ -0.69
CAPN1-223ENST00000533079 OR6C65A6NJZ3 312 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF208O43345 1280 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 UGT2B17O75795 530 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 PNPP00491 289 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 IGKV3-15P01624 115 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 GUSBP08236 651 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 CECR9P0C854 216 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 HOXB1P14653 301 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-223ENST00000533079 NPR2P20594 1047 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 SH3BGRP55822 239 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-223ENST00000533079 OR2B6P58173 313 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 MXRA7P84157 204 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 ADRM1Q16186 407 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 TRMT5Q32P41 509 aaKnown RBP10.76□□□□□ -0.69
CAPN1-223ENST00000533079 AGKQ53H12 422 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 BLOC1S3Q6QNY0 202 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 NET1Q7Z628 596 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-223ENST00000533079 FUNDC1Q8IVP5 155 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 PCYOX1LQ8NBM8 494 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 OR1K1Q8NGR3 316 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 OR2T11Q8NH01 316 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 CLHC1Q8NHS4 586 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 ROPN1LQ96C74 230 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 DOK1Q99704 481 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF350Q9GZX5 532 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 SLC52A3Q9NQ40 469 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 NOP53Q9NZM5 478 aaKnown RBP10.76□□□□□ -0.69
CAPN1-223ENST00000533079 KCNE3Q9Y6H6 103 aa10.76□□□□□ -0.69
CAPN1-223ENST00000533079 TRAV20A0A0B4J274 112 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 ZNF587BE7ETH6 402 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 PEX11AO75192 247 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 SLC22A3O75751 556 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 KRT33AO76009 404 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 EFNA1P20827 205 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 MAPK1P28482 360 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 IL1RL1Q01638 556 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 GPR68Q15743 365 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 ARHGAP11BQ3KRB8 267 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 RFTN2Q52LD8 501 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 REP15Q6BDI9 236 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms