RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 FBXO9Q9UK97 447 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-210ENST00000532538 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-210ENST00000532538 ARPC4-TTLL3A0A0A6YYG9 625 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 C5orf58C9J3I9 102 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 AKAP8O43823 692 aaKnown RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 SLC22A3O75751 556 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 PDE5AO76074 875 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 IL6P05231 212 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 PRG2P13727 222 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 NPR2P20594 1047 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 CALCRP30988 508 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 PPOXP50336 477 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 CHN2P52757 468 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 SH3BGRP55822 239 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 ARF1P84077 181 aaKnown RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 ZSWIM7Q19AV6 140 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 CEP85LQ5SZL2 805 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 SERPINA11Q86U17 422 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 EPHX4Q8IUS5 362 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 STK35Q8TDR2 534 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 NEU4Q8WWR8 484 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 TMEM19Q96HH6 336 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 ITCHQ96J02 903 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 TMEM109Q9BVC6 243 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 PLK3Q9H4B4 646 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 TPT1P8Q9HAU6 139 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
BRPF3-210ENST00000532538 IFT52Q9Y366 437 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 MXRA5Q9NR99 2828 aa13.2□□□□□ -0.3
BRPF3-210ENST00000532538 A0A0G2JPF8 293 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HNRNPCL2B2RXH8 293 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HNRNPCL3B7ZW38 293 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HNRNPCL1O60812 293 aaKnown RBP13.19□□□□□ -0.3
BRPF3-210ENST00000532538 STAMBPO95630 424 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 CELA3BP08861 270 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HNRNPCL4P0DMR1 293 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 PNMTP11086 282 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-210ENST00000532538 IFNGR1P15260 489 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 CBLP22681 906 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 THBS2P35442 1172 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 THBS4P35443 961 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 HOXC5Q00444 222 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 EFNB3Q15768 340 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 ADRM1Q16186 407 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 LINGO2Q7L985 606 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
BRPF3-210ENST00000532538 MFSD8Q8NHS3 518 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 SLC38A5Q8WUX1 472 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF317Q96PQ6 595 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-210ENST00000532538 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 LINC00470Q9BZP3 86 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 SEC61A2Q9H9S3 476 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 THUMPD1Q9NXG2 353 aaKnown RBP13.19□□□□□ -0.3
BRPF3-210ENST00000532538 SELENONQ9NZV5 590 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 GPR45Q9Y5Y3 372 aa13.19□□□□□ -0.3
BRPF3-210ENST00000532538 AIM2O14862 343 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 HDAC3O15379 428 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 SEC14L2O76054 403 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 IDO1P14902 403 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 NQO1P15559 274 aaKnown RBP13.18□□□□□ -0.3
BRPF3-210ENST00000532538 CBR1P16152 277 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 ARR3P36575 388 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 SNTB2Q13425 540 aaKnown RBP13.18□□□□□ -0.3
BRPF3-210ENST00000532538 DAG1Q14118 895 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 NUP37Q8NFH4 326 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-210ENST00000532538 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 SLC6A13Q9NSD5 602 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-210ENST00000532538 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-210ENST00000532538 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 PRDM4Q9UKN5 801 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 NOX1Q9Y5S8 564 aa13.18□□□□□ -0.3
BRPF3-210ENST00000532538 M0R3G1 203 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 TCF21O43680 179 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 OR2T1O43869 369 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 ADRA2AP08913 450 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 CD79AP11912 226 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 P2RY4P51582 365 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 NCALDP61601 193 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 CCNIQ14094 377 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 MAPK11Q15759 364 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 C3orf36Q3SXR2 165 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 GTDC1Q4AE62 458 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms