RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	ADGRA3	Q8IWK6	1321 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PCDH11X	Q9BZA7	1347 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NEO1	Q92859	1461 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MED19	A0JLT2	244 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GRID2IP	A4D2P6	1211 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GAPDHS	O14556	408 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	WISP2	O76076	250 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DHFR	P00374	187 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MMP1	P03956	469 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NBL1	P41271	181 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PRLHR	P49683	370 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ISL1	P61371	349 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LSM6	P62312	80 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SNRPN	P63162	240 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CCL7	P80098	99 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DHODH	Q02127	395 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CKAP4	Q07065	602 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	STX4	Q12846	297 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ITGA9	Q13797	1035 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC25A52	Q3SY17	297 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C1orf220	Q5T0J3	134 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR2G6	Q5TZ20	316 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C1orf146	Q5VVC0	180 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	VWA1	Q6PCB0	445 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR2W3	Q7Z3T1	314 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ARHGEF19	Q8IW93	802 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC35F2	Q8IXU6	374 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RELL2	Q8NC24	303 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR10A7	Q8NGE5	316 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FAM172A	Q8WUF8	416 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C22orf15	Q8WYQ4	148 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RND1	Q92730	232 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FAM84B	Q96KN1	310 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	WFIKKN1	Q96NZ8	548 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PRAP1	Q96NZ9	151 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ATP5S	Q99766	215 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MICU1	Q9BPX6	476 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	BCL2L14	Q9BZR8	327 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PPA2	Q9H2U2	334 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MLXIPL	Q9NP71	852 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TMEM74B	Q9NUR3	256 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	BABAM2	Q9NXR7	383 aa		4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	USP42	Q9H9J4	1324 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NSG1	A0A0A6YYJ2	146 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC5A10	A0PJK1	596 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MYMK	A6NI61	221 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SLC22A20	A6NK97	555 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNF487	B1APH4	448 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SULT1C2	O00338	296 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TNFSF11	O14788	317 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	MSH4	O15457	936 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ATP6V1G2	O95670	118 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CELA2B	P08218	269 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ME2	P23368	584 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GLRA1	P23415	457 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NUDT1	P36639	197 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NSG1	P42857	185 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	BDKRB1	P46663	353 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	BRCC3	P46736	316 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ERF	P50548	548 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CX3CL1	P78423	397 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FCHO2	Q0JRZ9	810 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PDIA2	Q13087	525 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PSG5	Q15238	335 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNHIT3	Q15649	155 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AWAT1	Q58HT5	328 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	CCNJ	Q5T5M9	372 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LINGO4	Q6UY18	593 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LINC00336	Q6ZUF6	198 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	AHSA2	Q719I0	299 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACBD4	Q8NC06	268 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OR2L5	Q8NG80	312 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FNDC8	Q8TC99	324 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	KCTD4	Q8WVF5	259 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PCED1B	Q96HM7	432 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	EBNA1BP2	Q99848	306 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	OPN4	Q9UHM6	478 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNF221	Q9UK13	617 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	USH1C	Q9Y6N9	552 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SIGLEC1	Q9BZZ2	1709 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	TEX51	A0A1B0GUA7	166 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967		F5H6K3	240 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LAD1	O00515	517 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ZNF195	O14628	629 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	NOS1AP	O75052	506 aa	Predicted RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	UTS2	O95399	124 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	SYF2	O95926	243 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	WNT1	P04628	370 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	PRKCG	P05129	697 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LIMS1	P48059	325 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	RPS6	P62753	249 aa	Known RBP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	C2orf80	Q0P641	193 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	GPNMB	Q14956	572 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	ACSM5	Q6NUN0	579 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	FAHD1	Q6P587	224 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LEG1	Q6P5S2	330 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	DHRS11	Q6UWP2	260 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967	USP43	Q70EL4	1123 aa		4.63	□□□□□ -1.67
ECHDC1-222	ENST00000531967		Q71RC1	249 aa	Predicted RBP	4.63	□□□□□ -1.67

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