RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ICAM5Q9UMF0 924 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC22A14Q9Y267 594 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 KCNIP3Q9Y2W7 256 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 L3MBTL1Q9Y468 752 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 PLEKHH1Q9ULM0 1364 aa3.58□□□□□ -1.84
AC055878.1-201ENST00000531858 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 A0A087WW49 117 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 MGAT4DA6NG13 374 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SAGE2PA6NJ88 616 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SMIM1B2RUZ4 78 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SULT2B1O00204 365 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 GOSR2O14653 212 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 GPAA1O43292 621 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 UGT1A9O60656 530 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SH3BGRLO75368 114 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 NUDT3O95989 172 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 LALBAP00709 142 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 IGHV3-9P01782 118 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 RPN2P04844 631 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 TACSTD2P09758 323 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 UBTFL1P0CB47 393 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PVRP15151 417 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 BCL3P20749 454 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 IVDP26440 423 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 GABRR2P28476 465 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 LEPP41159 167 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PLK1P53350 603 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 RPS14P62263 151 aaKnown RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SRPXP78539 464 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 MS4A13Q5J8X5 152 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PPM1LQ5SGD2 360 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 OR52E8Q6IFG1 317 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF549Q6P9A3 640 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 OR2W3Q7Z3T1 314 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ABHD12BQ7Z5M8 362 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 CMC1Q7Z7K0 106 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PLA2G4DQ86XP0 818 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 C12orf56Q8IXR9 622 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF100Q8IYN0 542 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SNX31Q8N9S9 440 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNRF1Q8ND25 227 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF740Q8NDX6 193 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 OR10V1Q8NGI7 309 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 OR6N2Q8NGY6 317 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 RFESDQ8TAC1 157 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 CA5BP1Q8WTZ4 195 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF486Q96H40 463 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 OXGR1Q96P68 337 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM204Q9BSN7 226 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 MAP1LC3CQ9BXW4 147 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 CDHR2Q9BYE9 1310 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 NEUROG2Q9H2A3 272 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SYT4Q9H2B2 425 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 HIPK2Q9H2X6 1198 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 USP42Q9H9J4 1324 aaKnown RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 UCK1Q9HA47 277 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ADGRL4Q9HBW9 690 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 AMBNQ9NP70 447 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 FGF20Q9NP95 211 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 B3GAT2Q9NPZ5 323 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PRSS16Q9NQE7 514 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF71Q9NQZ8 489 aaPredicted RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 STK36Q9NRP7 1315 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 FANCIQ9NVI1 1328 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 EURLQ9NYK6 297 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 CCDC59Q9P031 241 aaKnown RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF229Q9UJW7 825 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 GGA2Q9UJY4 613 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 MGAT4AQ9UM21 535 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 SPATA2Q9UM82 520 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 DDX19BQ9UMR2 479 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 UBQLN1Q9UMX0 589 aaKnown RBP3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PSMD13Q9UNM6 376 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 PPP1R3CQ9UQK1 317 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 HYOU1Q9Y4L1 999 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 FADS3Q9Y5Q0 445 aa3.57□□□□□ -1.84
AC055878.1-201ENST00000531858 LOC100131303A0A0U1RQF7 123 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 A0A1B0GTH9 108 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 A0A1B0GUS0 222 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM213A2RRL7 107 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC22A20A6NK97 555 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CDC7O00311 574 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CCL21O00585 134 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ITGB1BP1O14713 200 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MRPS12O15235 138 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MYO1DO94832 1006 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 KLK1P06870 262 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 PNMA6AP0CW24 399 aaPredicted RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CTRB1P17538 263 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MARK3P27448 753 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 PSMB6P28072 239 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 NR4A2P43354 598 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC26A2P50443 739 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ATP12AP54707 1039 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 DSCR9P59020 149 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MRPS11P82912 194 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 PUDPQ08623 228 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms