RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 BHLHA15Q7RTS1 189 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 NKAIN4Q8IVV8 208 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 C10orf53Q8N6V4 93 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 FAM156AQ8NDB6 213 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 GEMIN6Q8WXD5 167 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 KISS1RQ969F8 398 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 S100PBPQ96BU1 408 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 ZC3HAV1LQ96H79 300 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 USB1Q9BQ65 265 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 POLDIP3Q9BY77 421 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 MRPL39Q9NYK5 338 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 B3GAT1Q9P2W7 334 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 A4GNTQ9UNA3 340 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 SNX13Q9Y5W8 968 aa11.19□□□□□ -0.62
CCDC90B-216ENST00000529856 LRBAP50851 2863 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 PDLIM1O00151 329 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 PLPP3O14495 311 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 SIAH2O43255 324 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 LYZL6O75951 148 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 CH25HO95992 272 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 HRGP04196 525 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 IFNW1P05000 195 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 NQO1P15559 274 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 ZNF43P17038 809 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 CALB2P22676 271 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 RBM34P42696 430 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 YAP1P46937 504 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 ST3GAL3Q11203 375 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 FAPQ12884 760 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 PMS2P3Q13401 168 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 ZNF74Q16587 644 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 CDC20BQ86Y33 519 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 ZNF433Q8N7K0 673 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 POMGNT2Q8NAT1 580 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 RBM15BQ8NDT2 890 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 OR5J2Q8NH18 312 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 TMEM255BQ8WV15 326 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 TMEM239Q8WW34 195 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 HSD17B8Q92506 261 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 PRRC1Q96M27 445 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 HS6ST2Q96MM7 605 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 MEPEQ9NQ76 525 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 ASB6Q9NWX5 421 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 UPB1Q9UBR1 384 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 PDZD2O15018 2839 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 MAST4O15021 2626 aa11.18□□□□□ -0.62
CCDC90B-216ENST00000529856 J3KTA2 159 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 KPNA4O00629 521 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 FFAR1O14842 300 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 KLF4O43474 513 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 ZNF432O94892 652 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 HPRP00739 348 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 IGF2P01344 180 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 MT-ND1P03886 318 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 IFNA8P32881 189 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 MSX2P35548 267 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 SELENOPP49908 381 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 UGT2B15P54855 530 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 CLDN17P56750 224 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 FOXD4Q12950 439 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 C1DQ13901 141 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 FBXW10Q5XX13 1052 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 NIPAL3Q6P499 406 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 NHLRC1Q6VVB1 395 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 RINLQ6ZS11 566 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 TRPM8Q7Z2W7 1104 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 TSEN54Q7Z6J9 526 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 LRRC17Q8N6Y2 441 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 FNDC11Q9BVV2 318 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 SLCO5A1Q9H2Y9 848 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 FKRPQ9H9S5 495 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 NANSQ9NR45 359 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 TAS2R16Q9NYV7 291 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 MAGEL2Q9UJ55 1249 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 SAMD4AQ9UPU9 718 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 ABCA4P78363 2273 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 PRR14LQ5THK1 2151 aa11.17□□□□□ -0.62
CCDC90B-216ENST00000529856 CIB4A0PJX0 185 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 OR6C65A6NJZ3 312 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 TRAF3IP2O43734 574 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 PRSS23O95084 383 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 HIST1H2ABP04908 130 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 ITGA5P08648 1049 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 HLA-DOBP13765 273 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 FUT4P22083 530 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 LOXP28300 417 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 MPGP29372 298 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 DNAJA1P31689 397 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms