RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 AVPI1Q5T686 147 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 PRAMEF8Q5VWM4 474 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 PRAMEF7Q5VXH5 474 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 OLFML2AQ68BL7 652 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 ASPHD2Q6ICH7 369 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 TMEM154Q6P9G4 183 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 TIFABQ6ZNK6 161 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 RNF165Q6ZSG1 346 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 EPHX4Q8IUS5 362 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 WDFY1Q8IWB7 410 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 KIR3DL3Q8N743 410 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 DEFB108BQ8NET1 73 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 OR5D16Q8NGK9 328 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 GPR35Q9HC97 309 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 EXD2Q9NVH0 621 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 ATAD3AQ9NVI7 634 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 MYEF2Q9P2K5 600 aaKnown RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 RCE1Q9Y256 329 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 POLR3KQ9Y2Y1 108 aaPredicted RBP9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 WIPI2Q9Y4P8 454 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 AUP1Q9Y679 476 aa9.9□□□□□ -0.82
AMBRA1-207ENST00000529553 IGHV1-69-2A0A0G2JMI3 117 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 SLC22A23A1A5C7 686 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 ZC3H12DA2A288 527 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 CLDN25C9JDP6 229 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 CDC14BO60729 498 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 BCAS1O75363 584 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 GSTA1P08263 222 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 SNRPAP09012 282 aaKnown RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 LAMP1P11279 417 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 NEFHP12036 1026 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 ZNF14P17017 642 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 OMGP23515 440 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 PCGF2P35227 344 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 HPCAL1P37235 193 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 MAGEB1P43366 347 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 LCN2P80188 198 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 GALK2Q01415 458 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 HLXQ14774 488 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 FAM153CQ494X1 144 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 GLIPR1L2Q4G1C9 344 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 ATP6AP1LQ52LC2 224 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 FAM209AQ5JX71 171 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 SYT10Q6XYQ8 523 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 SPATC1Q76KD6 591 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 RELL1Q8IUW5 271 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 CCNYL1Q8N7R7 359 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 GLB1L3Q8NCI6 653 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 CLHC1Q8NHS4 586 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 COQ8BQ96D53 544 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 ZNF75AQ96N20 296 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 PAFAH2Q99487 392 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 TAPBPLQ9BX59 468 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 LEF1Q9UJU2 399 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 FBXL3Q9UKT7 428 aa9.89□□□□□ -0.83
AMBRA1-207ENST00000529553 A0A1W2PPW3 197 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 SLC22A31A6NKX4 558 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 ZNF99A8MXY4 864 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 PIN1P1O15428 100 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 SCN2BO60939 215 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 SLC43A1O75387 559 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 NDUFA7O95182 113 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 NGFP01138 241 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 UQCRBP14927 111 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 CXCR1P25024 350 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 CAPZA2P47755 286 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 CCL8P80075 99 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 TAF9Q16594 264 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 MOGQ16653 247 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 NKPD1Q17RQ9 610 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 GSG1Q2KHT4 349 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 HFEQ30201 348 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 FAM205BPQ63HN1 556 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 TYW3Q6IPR3 259 aaKnown RBP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 FRMD7Q6ZUT3 714 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 C16orf62Q7Z3J2 963 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 REC114Q7Z4M0 266 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 C6orf120Q7Z4R8 191 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 C1QL4Q86Z23 238 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 SPATA4Q8NEY3 305 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 OR7A2PQ8NGA2 310 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 MIPOL1Q8TD10 442 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 MGARPQ8TDB4 240 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 ST7LQ8TDW4 575 aa9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 TAF15Q92804 592 aaKnown RBP eCLIP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 TRIM44Q96DX7 344 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 PRPF18Q99633 342 aaKnown RBP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 MS4A7Q9GZW8 240 aaPredicted RBP9.88□□□□□ -0.83
AMBRA1-207ENST00000529553 GRPEL1Q9HAV7 217 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms