RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	PRR14L	Q5THK1	2151 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	CPSF4L	A6NMK7	179 aa	Known RBP	10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	SHISA9	B4DS77	424 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	AIM2	O14862	343 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF432	O94892	652 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	BGLAP	P02818	100 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC25A3	Q00325	362 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF672	Q499Z4	452 aa	Predicted RBP	10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	ENTPD8	Q5MY95	495 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362		Q5PR19	223 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	NIPAL3	Q6P499	406 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	LINC00114	Q6XXX2	140 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	H1FNT	Q75WM6	255 aa	Predicted RBP	10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	LINGO2	Q7L985	606 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	LRRC75A-AS1	Q8N1F1	130 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	C17orf78	Q8N4C9	275 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	PCYOX1L	Q8NBM8	494 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	ADPRHL1	Q8NDY3	354 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	PERP	Q96FX8	193 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC41A3	Q96GZ6	507 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	OXGR1	Q96P68	337 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	MOGAT1	Q96PD6	335 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	EPYC	Q99645	322 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	TMEM43	Q9BTV4	400 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	PCDHAC1	Q9H158	963 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC17A5	Q9NRA2	495 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	GID8	Q9NWU2	228 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	RCE1	Q9Y256	329 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	B3GALT5	Q9Y2C3	310 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	FREM1	Q5H8C1	2179 aa		10.32	□□□□□ -0.76
PSMC3-205	ENST00000528362	VPS13C	Q709C8	3753 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	LOC102725191	A0A1B0GVB3	256 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	FAM220BP	B1ANY3	271 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	LRRN3	E7EW58	273 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ABCD4	O14678	606 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	TRAF3IP2	O43734	574 aa	Predicted RBP	10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	CHP2	O43745	196 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	UPK3A	O75631	287 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	HPR	P00739	348 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	SOD3	P08294	240 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF43	P17038	809 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	CDH2	P19022	906 aa	Predicted RBP	10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	TNFRSF1B	P20333	461 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF83	P51522	516 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	CLDN17	P56750	224 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	TGFBR3	Q03167	851 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	C1D	Q13901	141 aa	Known RBP	10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	VEZF1	Q14119	521 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	SHE	Q5VZ18	495 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ERICH5	Q6P6B1	374 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	SPATA21	Q7Z572	469 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	RP9	Q8TA86	221 aa	Known RBP	10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	SLC26A7	Q8TE54	656 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ADAMTS16	Q8TE57	1224 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	FBXW5	Q969U6	566 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	BOD1	Q96IK1	185 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	GSX2	Q9BZM3	304 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	CMTM6	Q9NX76	183 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	GMPR2	Q9P2T1	348 aa	Known RBP	10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	CORIN	Q9Y5Q5	1042 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	ACAN	P16112	2415 aa		10.31	□□□□□ -0.76
PSMC3-205	ENST00000528362	TRAPPC13	A5PLN9	417 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR6C65	A6NJZ3	312 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF587B	E7ETH6	402 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	MS4A18	H0YCH9	400 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	CCDC22	O60826	627 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	TMCC2	O75069	709 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	KRT33A	O76009	404 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	DANCR	P0C864	163 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	COX4I1	P13073	169 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	HLA-DOB	P13765	273 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	PAX1	P15863	534 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	CD40	P25942	277 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	PTH2R	P49190	550 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	SEC24C	P53992	1094 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	CDH11	P55287	796 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	SPOCK1	Q08629	439 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	MFSD13A	Q14CX5	517 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	PGGHG	Q32M88	737 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	MS4A18	Q3C1V0	323 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	HIKESHI	Q53FT3	197 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	TMEM108	Q6UXF1	575 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	NHLRC1	Q6VVB1	395 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	CARM1	Q86X55	608 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	TREML1	Q86YW5	311 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	SCAI	Q8N9R8	606 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR2T12	Q8NG77	320 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR1K1	Q8NGR3	316 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	SMAP2	Q8WU79	429 aa	Predicted RBP	10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	TMEM171	Q8WVE6	324 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	RASSF5	Q8WWW0	418 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	PROX1	Q92786	737 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	OR2M2	Q96R28	347 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ELAC2	Q9BQ52	826 aa	Known RBP	10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ZNF426	Q9BUY5	554 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	C1QTNF6	Q9BXI9	259 aa		10.3	□□□□□ -0.76
PSMC3-205	ENST00000528362	ASPN	Q9BXN1	380 aa		10.3	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms