RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CCL19Q99731 98 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 EFCAB1Q9HAE3 211 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 B3GAT1Q9P2W7 334 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 MGAT4BQ9UQ53 548 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 RCE1Q9Y256 329 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 SLC25A15Q9Y619 301 aa10.65□□□□□ -0.7
TRAPPC4-209ENST00000528230 ROS1P08922 2347 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ARID1AO14497 2285 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 CADP27708 2225 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 TRAPPC13A5PLN9 417 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 MS4A18H0YCH9 400 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 M0R082 166 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ARHGEF9O43307 516 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 KRT33AO76009 404 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF432O94892 652 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 MT-ATP6P00846 226 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 BGLAPP02818 100 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 COX4I1P13073 169 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 CD99P14209 185 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 PAX1P15863 534 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 PTAFRP25105 342 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 KDELR2P33947 212 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 SELENOPP49908 381 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 FOXG1P55316 489 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 NKX6-1P78426 367 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 LTBQ06643 244 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 BSPH1Q075Z2 132 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 C1DQ13901 141 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 MS4A18Q3C1V0 323 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 KLHL17Q6TDP4 642 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 PRSS57Q6UWY2 283 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 SPATA21Q7Z572 469 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 KDM8Q8N371 416 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 POU5F2Q8N7G0 328 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 WDR31Q8NA23 367 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 OR2T12Q8NG77 320 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 OR4D11Q8NGI4 311 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 LILRB1Q8NHL6 650 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF417Q8TAU3 575 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ADAMTS16Q8TE57 1224 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 RCN3Q96D15 328 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF587Q96SQ5 575 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 HOPXQ9BPY8 73 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ELAC2Q9BQ52 826 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ASPNQ9BXN1 380 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC19A3Q9BZV2 496 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 POLR2J2Q9GZM3 115 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 POLR2J3Q9H1A7 115 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 OBP2BQ9NPH6 170 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC17A5Q9NRA2 495 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 MRPL39Q9NYK5 338 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 AMDHD2Q9Y303 409 aa10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 MAGED1Q9Y5V3 778 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-209ENST00000528230 ELOVL7A1L3X0 281 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CPSF4LA6NMK7 179 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF587BE7ETH6 402 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 RPL36A-HNRNPH2H7BZ11 118 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 NDUFAB1O14561 156 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CLOCKO15516 846 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 AKAP8O43823 692 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 LYPD3O95274 346 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 FOSL1P15407 271 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 SEC24CP53992 1094 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CLDN17P56750 224 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 PRPS1P60891 318 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF672Q499Z4 452 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 TTC33Q6PID6 262 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 TMEM108Q6UXF1 575 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 HACD2Q6Y1H2 254 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CARM1Q86X55 608 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 RBM45Q8IUH3 476 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 P3H2Q8IVL5 708 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 MICU2Q8IYU8 434 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 OR52N5Q8NH56 324 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 VANGL1Q8TAA9 524 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 TMEM171Q8WVE6 324 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 FBXW5Q969U6 566 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CMTM5Q96DZ9 223 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 ZNF426Q9BUY5 554 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 GSX2Q9BZM3 304 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 NSRP1Q9H0G5 558 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 MYLK2Q9H1R3 596 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 CMTM6Q9NX76 183 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 NPAP1Q9NZP6 1156 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 SEC14L4Q9UDX3 406 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 SH3GLB1Q9Y371 365 aa10.63□□□□□ -0.71
TRAPPC4-209ENST00000528230 HIVEP1P15822 2718 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 GMNCA6NCL1 334 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 SNX3O60493 162 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC43A1O75387 559 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 UPK3AO75631 287 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 WNT11O96014 354 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 THY1P04216 161 aa10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 NQO1P15559 274 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-209ENST00000528230 CBLP22681 906 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms