RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PRKAR1BP31321 381 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 COMPP49747 757 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 SCGB2A2Q13296 93 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 CEACAM7Q14002 265 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 GABRA6Q16445 453 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 TTMPQ5BVD1 217 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF311Q5JNZ3 666 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 OTUD3Q5T2D3 398 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM225Q6GV28 225 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 HDXQ7Z353 690 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 C17orf78Q8N4C9 275 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 C1orf162Q8NEQ5 155 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 SPDL1Q96EA4 605 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 DNAJA3Q96EY1 480 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 TAPBPLQ9BX59 468 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 RABEP2Q9H5N1 569 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 OCEL1Q9H607 264 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 EVA1AQ9H8M9 152 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 C12orf10Q9HB07 376 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 MYOZ1Q9NP98 299 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 SLC25A37Q9NYZ2 338 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 NPAP1Q9NZP6 1156 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 TMEFF2Q9UIK5 374 aaPredicted RBP9.2□□□□□ -0.94
CPSF1-203ENST00000527916 SLC25A15Q9Y619 301 aa9.2□□□□□ -0.94
CPSF1-203ENST00000527916 TRBV5-3A0A0A0MS03 114 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CCT8L1PA6NM43 557 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM229AB2RXF0 380 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 FZD7O75084 574 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 RAD51DO75771 328 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 LY6HO94772 140 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 IGHV3-9P01782 118 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ITGA5P08648 1049 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ARAFP10398 606 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 PRG2P13727 222 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF23P17027 643 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 NCF2P19878 526 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-203ENST00000527916 PCMT1P22061 227 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 PAX7P23759 505 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CD40P25942 277 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF83P51522 516 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 P2RY4P51582 365 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 AQP5P55064 265 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TGFBR3Q03167 851 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 OR7A5Q15622 319 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CARTPTQ16568 116 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 RPS26P11Q5JNZ5 115 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-203ENST00000527916 PAGE3Q5JUK9 113 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 REEP3Q6NUK4 255 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 DHRS4L2Q6PKH6 230 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 C6orf89Q6UWU4 347 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ABHD12BQ7Z5M8 362 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-203ENST00000527916 SERPINA11Q86U17 422 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CADM2Q8N3J6 435 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM99Q8N816 258 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 LSMEM1Q8N8F7 131 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 ZIC4Q8N9L1 334 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 POMGNT2Q8NAT1 580 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 MFSD8Q8NHS3 518 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TSPEARQ8WU66 669 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 DYDC1Q8WWB3 177 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CKAP2Q8WWK9 683 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 GCDHQ92947 438 aaPredicted RBP9.19□□□□□ -0.94
CPSF1-203ENST00000527916 MAL2Q969L2 176 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 MAGEB18Q96M61 343 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 SPATA5L1Q9BVQ7 753 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM38AQ9H6F2 299 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 FKRPQ9H9S5 495 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 SLC7A10Q9NS82 523 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
CPSF1-203ENST00000527916 VAPAQ9P0L0 249 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 UPB1Q9UBR1 384 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 CORO2BQ9UQ03 480 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
CPSF1-203ENST00000527916 IGHV4-61A0A0C4DH41 118 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 OR6C65A6NJZ3 312 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 EVPLLA8MZ36 301 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 C5orf58C9J3I9 102 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 FRS3O43559 492 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 OR2T1O43869 369 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 AKR7A3O95154 331 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 MPGP29372 298 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 APOBEC3AP31941 199 aaPredicted RBP9.18□□□□□ -0.94
CPSF1-203ENST00000527916 CDK6Q00534 326 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 BNIP2Q12982 314 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 PDLIM3Q53GG5 364 aaPredicted RBP9.18□□□□□ -0.94
CPSF1-203ENST00000527916 AGKQ53H12 422 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 GCNT6Q5T4J0 391 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 TSPO2Q5TGU0 170 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 C5orf46Q6UWT4 87 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 CASP12Q6UXS9 341 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 CREB3L2Q70SY1 520 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 AAED1Q7RTV5 226 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 KRT73Q86Y46 540 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 WDR31Q8NA23 367 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 BHLHE22Q8NFJ8 381 aaPredicted RBP9.18□□□□□ -0.94
CPSF1-203ENST00000527916 OR9K2Q8NGE7 335 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms