RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CMC2Q9NRP2 79 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 BAIAP2Q9UQB8 552 aa16.97■□□□□ 0.31
SMPD1-203ENST00000527275 TPRP12270 2363 aaKnown RBP16.97■□□□□ 0.31
SMPD1-203ENST00000527275 DSPP15924 2871 aaKnown RBP16.97■□□□□ 0.31
SMPD1-203ENST00000527275 PINLYPA6NC86 204 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 CCRL2O00421 344 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 CLPXO76031 633 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SCG5P05408 212 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SP1P08047 785 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SLC6A6P31641 620 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 C1DQ13901 141 aaKnown RBP16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SLC43A2Q8N370 569 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 NPAS1Q99742 590 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 TAPBPLQ9BX59 468 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 OR51E2Q9H255 320 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 PTGES2Q9H7Z7 377 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 TAS2R10Q9NYW0 307 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 MED12Q93074 2177 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 TACR3P29371 465 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 TGFBR1P36897 503 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 CD97P48960 835 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 C19orf48Q6RUI8 117 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SHFQ7M4L6 423 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 GALNTL5Q7Z4T8 443 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 ZBTB46Q86UZ6 589 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 SULF2Q8IWU5 870 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 LRRC17Q8N6Y2 441 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 ZHX1-C8orf76Q96EF9 292 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 ADAM19Q9H013 955 aa16.96■□□□□ 0.31
SMPD1-203ENST00000527275 PCDHGA9Q9Y5G4 932 aaKnown RBP16.96■□□□□ 0.31
SMPD1-203ENST00000527275 TNRC6AQ8NDV7 1962 aaKnown RBP16.96■□□□□ 0.31
SMPD1-203ENST00000527275 IGKV1D-42A0A075B6H8 117 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 LRRN3E7EW58 273 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 PPP1R3DO95685 299 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 CD46P15529 392 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 PRKCAP17252 672 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 SLC9A3P48764 834 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF41P51814 821 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 CXADRP78310 365 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 FOXO1Q12778 655 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 SLC25A25Q6KCM7 469 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 POMZP3Q6PJE2 187 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 GID4Q8IVV7 300 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 OR2M7Q8NG81 312 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 DYNC2LI1Q8TCX1 351 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 C1GALT1C1Q96EU7 318 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 MED20Q9H944 212 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 EXOGQ9Y2C4 368 aaKnown RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 EXOSC1Q9Y3B2 195 aaKnown RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 FREM3P0C091 2139 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 MPDZO75970 2070 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 LOC100506127A0A0U1RQW1 187 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 HTR3EA5X5Y0 456 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 LRRC3CA6NJW4 275 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 NME2P1O60361 137 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 OR7A10O76100 309 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 NDUFB2O95178 105 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 PEPDP12955 493 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 GP1BBP13224 206 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 HK1P19367 917 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 NME2P22392 152 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 TCEA1P23193 301 aaKnown RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 NOS3P29474 1203 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 SSX1Q16384 188 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 DGUOKQ16854 277 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF362Q5T0B9 420 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 MEPCEQ7L2J0 689 aaKnown RBP16.95■□□□□ 0.3
SMPD1-203ENST00000527275 ATCAYQ86WG3 371 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 OR4F15Q8NGB8 312 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 TMEM234Q8WY98 164 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 EXTL1Q92935 676 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 PTP4A1Q93096 173 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 C5orf34Q96MH7 638 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 FAM173AQ9BQD7 235 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 TMEM43Q9BTV4 400 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 OSGIN1Q9UJX0 560 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF337Q9Y3M9 751 aa16.95■□□□□ 0.3
SMPD1-203ENST00000527275 RIIAD1A6NNX1 92 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 CBR3O75828 277 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 RFPL3SP0C7P2 107 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 UGT2B10P36537 528 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ATP6V1E1P36543 226 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ENTPD1P49961 510 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 MOGQ16653 247 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 PLPPR5Q32ZL2 321 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ZNF766Q5HY98 468 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 GRINAQ7Z429 371 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 ST8SIA1Q92185 356 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 SH3GL3Q99963 347 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 CHCHD6Q9BRQ6 235 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 KLF13Q9Y2Y9 288 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 SPENQ96T58 3664 aaKnown RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 PIEZO2Q9H5I5 2752 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 TMEM129A0AVI4 362 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 SHISA8B8ZZ34 492 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 PRR23D1E9PI22 279 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 PRR23D2P0DMB1 279 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-203ENST00000527275 RFC3P40938 356 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 FOXK1P85037 733 aa16.94■□□□□ 0.3
SMPD1-203ENST00000527275 MLLT11Q13015 90 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms