RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 BPIFB3P59826 476 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 EIF3EP60228 445 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 SEMG2Q02383 582 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 BCL2L1Q07817 233 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 XRCC4Q13426 336 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 LASP1Q14847 261 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 ZNF239Q16600 458 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 CLPPQ16740 277 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 HAGHQ16775 308 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 HKDC1Q2TB90 917 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 HFEQ30201 348 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TMEM52BQ4KMG9 183 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 C14orf28Q4W4Y0 310 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 GCNT7Q6ZNI0 430 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 BZW1Q7L1Q6 419 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 HORMAD1Q86X24 394 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 SLC13A5Q86YT5 568 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 CDKL3Q8IVW4 592 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 ZNF567Q8N184 647 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 SLC35F6Q8N357 371 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 ARL10Q8N8L6 244 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TMEM185AQ8NFB2 350 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 OR4F5Q8NH21 305 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 OR52J3Q8NH60 311 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TFB1MQ8WVM0 346 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 HTR3CQ8WXA8 447 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TMEM37Q8WXS4 190 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 P3H4Q92791 437 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 KLK6Q92876 244 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 PNPLA2Q96AD5 504 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RAB7BQ96AH8 199 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TADA1Q96BN2 335 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 RAB3CQ96E17 227 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 ZNF641Q96N77 438 aaPredicted RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 FOXN4Q96NZ1 517 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 SMIM14Q96QK8 99 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 APOL2Q9BQE5 337 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 WRAP53Q9BUR4 548 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 EDEM2Q9BV94 578 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 CARD9Q9H257 536 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TM9SF3Q9HD45 589 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 ABCD2Q9UBJ2 740 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 TRMT6Q9UJA5 497 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 IKZF3Q9UKT9 509 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 CA5BQ9Y2D0 317 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.02□□□□□ -1.93
CD44-219ENST00000525685 TMEM131Q92545 1883 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 FER1L5A0AVI2 2057 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 LRRK1Q38SD2 2015 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 NUP205Q92621 2012 aa3.02□□□□□ -1.93
CD44-219ENST00000525685 MYLKQ15746 1914 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ADAMTS9Q9P2N4 1935 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TRAV9-2A0A087WT02 112 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 A0A0J9YYE9 177 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 A0A1W2PQ67 120 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 H7C0C1 242 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SLC31A1O15431 190 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ZSCAN12O43309 604 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ZBTB14O43829 449 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 NEBLO76041 1014 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TM7SF2O76062 418 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TRBC1P01850 177 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 HCKP08631 526 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ALPIP09923 528 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 STMN1P16949 149 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 HNRNPA2B1P22626 353 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 NUDT1P36639 197 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ATP5OP48047 213 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 CSNK1EP49674 416 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 CSRP3P50461 194 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ARHGDIAP52565 204 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 MFAP2P55001 183 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 CASP9P55211 416 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 RPS21P63220 83 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 ELP6Q0PNE2 266 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 IRF4Q15306 451 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 PCK2Q16822 640 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TEX44Q53QW1 395 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ACER2Q5QJU3 275 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TPRG1LQ5T0D9 272 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ARMC12Q5T9G4 340 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 AP1ARQ63HQ0 302 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 LRRC66Q68CR7 880 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SPINK14Q6IE38 97 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 IRGCQ6NXR0 463 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 NEK5Q6P3R8 708 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 KDELC1Q6UW63 502 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 DLEU7Q6UYE1 221 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 RABEPKQ7Z6M1 372 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TAF8Q7Z7C8 310 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SPAG16Q8N0X2 631 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SLC22A18ASQ8N1D0 253 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 CENPSQ8N2Z9 138 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 FGFRL1Q8N441 504 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 DENND6BQ8NEG7 585 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 OR6T1Q8NGN1 323 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ZNF671Q8TAW3 534 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 CCDC110Q8TBZ0 833 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms