RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 PTAFRP25105 342 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 GTF2E2P29084 291 aaKnown RBP9.63□□□□□ -0.87
CTSB-207ENST00000524654 GRPRP30550 384 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 PTH2RP49190 550 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 SLC25A3Q00325 362 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 LTBQ06643 244 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 LGALS3BPQ08380 585 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 VEZF1Q14119 521 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 PGGHGQ32M88 737 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 Q5PR19 223 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 NIPAL3Q6P499 406 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 TMEM108Q6UXF1 575 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 LINGO2Q7L985 606 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 TSPYL5Q86VY4 417 aaPredicted RBP9.63□□□□□ -0.87
CTSB-207ENST00000524654 RBM45Q8IUH3 476 aaKnown RBP9.63□□□□□ -0.87
CTSB-207ENST00000524654 SMAP2Q8WU79 429 aaPredicted RBP9.63□□□□□ -0.87
CTSB-207ENST00000524654 TMEM171Q8WVE6 324 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 FBXW5Q969U6 566 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 PERPQ96FX8 193 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 RADILQ96JH8 1075 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 EPYCQ99645 322 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 ECSITQ9BQ95 431 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 TMEM43Q9BTV4 400 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 LINC00470Q9BZP3 86 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 PCDHAC1Q9H158 963 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 CXorf56Q9H5V9 222 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 SLC17A5Q9NRA2 495 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 SELENONQ9NZV5 590 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 ARMCX1Q9P291 453 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 RCE1Q9Y256 329 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 CORINQ9Y5Q5 1042 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 CAPN7Q9Y6W3 813 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 MPDZO75970 2070 aa9.63□□□□□ -0.87
CTSB-207ENST00000524654 ZNF469Q96JG9 3925 aaPredicted RBP9.63□□□□□ -0.87
CTSB-207ENST00000524654 ABCA4P78363 2273 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MS4A18H0YCH9 400 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 OVOL3O00110 214 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ABCD4O14678 606 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 TRAF3IP2O43734 574 aaPredicted RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 CHP2O43745 196 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 UPK3AO75631 287 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 HPRP00739 348 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ZNF43P17038 809 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 CD40P25942 277 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ZNF83P51522 516 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 CLDN17P56750 224 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MFSD13AQ14CX5 517 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MS4A18Q3C1V0 323 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ENTPD8Q5MY95 495 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 KLHL17Q6TDP4 642 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 NHLRC1Q6VVB1 395 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 WDR88Q6ZMY6 472 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ABHD12BQ7Z5M8 362 aaPredicted RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 SCAIQ8N9R8 606 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 PCYOX1LQ8NBM8 494 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ANKK1Q8NFD2 765 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 RP9Q8TA86 221 aaKnown RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 VANGL1Q8TAA9 524 aaPredicted RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ADAMTS16Q8TE57 1224 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 RASSF5Q8WWW0 418 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MOGAT1Q96PD6 335 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 ZNF426Q9BUY5 554 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 GID8Q9NWU2 228 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MRPL39Q9NYK5 338 aaKnown RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 CISD1Q9NZ45 108 aaKnown RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 USP22Q9UPT9 525 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 MGAT4BQ9UQ53 548 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 AMDHD2Q9Y303 409 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
CTSB-207ENST00000524654 RAI1Q7Z5J4 1906 aaPredicted RBP9.62□□□□□ -0.87
CTSB-207ENST00000524654 TRAPPC13A5PLN9 417 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 CPSF4LA6NMK7 179 aaKnown RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 ZNF587BE7ETH6 402 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 LRRN3E7EW58 273 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 RPL36A-HNRNPH2H7BZ11 118 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 KRT33AO76009 404 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 MT-ATP6P00846 226 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 CDH2P19022 906 aaPredicted RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 PTNP21246 168 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 CBLP22681 906 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 RIPPLY3P57055 190 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 PRPS1P60891 318 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 RPS4XP62701 263 aaKnown RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 SPOCK1Q08629 439 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 C1DQ13901 141 aaKnown RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 HIKESHIQ53FT3 197 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 ERICH5Q6P6B1 374 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 TMEM123Q8N131 208 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 OR1K1Q8NGR3 316 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 SLC26A7Q8TE54 656 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 BCL2L2Q92843 193 aaPredicted RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 RCN3Q96D15 328 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 C18orf12Q96KH6 178 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 ALKBH3Q96Q83 286 aaPredicted RBP9.61□□□□□ -0.87
CTSB-207ENST00000524654 OR2M2Q96R28 347 aa9.61□□□□□ -0.87
CTSB-207ENST00000524654 C1QTNF6Q9BXI9 259 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms