RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 GABRG2P18507 467 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CCR9P51686 369 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 FUT7Q11130 342 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 C1orf61Q13536 156 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 HTR4Q13639 388 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 FAM109AQ8N4B1 249 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF433Q8N7K0 673 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 DACT3Q96B18 629 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 Q96M85 177 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 C20orf85Q9H1P6 137 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 DIABLOQ9NR28 239 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 RXFP3Q9NSD7 469 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 MRPL15Q9P015 296 aaKnown RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 PIAS3Q9Y6X2 628 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 U3KQ87 197 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 TMEM131Q92545 1883 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 BLACEA4D250 179 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ELOA3DA6NLF2 546 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 C10orf142B7Z368 130 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 BLOC1S5-TXNDC5H3BN57 136 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CLDN4O14493 209 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 NDUFB5O43674 189 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 SSNA1O43805 119 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 GMDSO60547 372 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 TPOP07202 933 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 MAOAP21397 527 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 AQP2P41181 271 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 SKP1P63208 163 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CAMK2DQ13557 499 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ELOA3BQ3SY89 546 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 KLHL26Q53HC5 615 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 FAM69AQ5T7M9 428 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 SLC6A19Q695T7 634 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 SFRP4Q6FHJ7 346 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 FCRLAQ7L513 359 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CDH24Q86UP0 819 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF440Q8IYI8 595 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF615Q8N8J6 731 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF511Q8NB15 262 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ELOA3Q8NG57 546 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 OR52I2Q8NH67 350 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ANGPTL6Q8NI99 470 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 GCDHQ92947 438 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 GPR174Q9BXC1 333 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 NKX2-4Q9H2Z4 354 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 BEX1Q9HBH7 125 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 HRASLSQ9HDD0 168 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 DLL4Q9NR61 685 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 AKAP7Q9P0M2 348 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 CLEC1BQ9P126 229 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF346Q9UL40 294 aaKnown RBP10.11□□□□□ -0.79
HDAC9-228ENST00000524023 RCE1Q9Y256 329 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 V9GY05 133 aa10.11□□□□□ -0.79
HDAC9-228ENST00000524023 A0A087WV48 116 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SPTY2D1-AS1A0A0U1RR47 76 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 GABARAPH6UMI1 98 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SRPX2O60687 465 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 TMEM127O75204 238 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 PEX14O75381 377 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ITGA10O75578 1167 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SLC22A5O76082 557 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ECDO95905 644 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 HPXP02790 462 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 RAF1P04049 648 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 CLPSP04118 112 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 CTSEP14091 401 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 POU3F3P20264 500 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 GRK6P43250 576 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SLC25A1P53007 311 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 CLDN12P56749 244 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ZP1P60852 638 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 FZD2Q14332 565 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SHHQ15465 462 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 TMEM255AQ5JRV8 349 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 WBP2NLQ6ICG8 309 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SLC16A9Q7RTY1 509 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 FAM122BQ7Z309 247 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 JAZF1Q86VZ6 243 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 SERPINA12Q8IW75 414 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 EXD3Q8N9H8 876 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 LRRC75AQ8NAA5 344 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 GATSQ8NAP1 163 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 FAM71CQ8NEG0 241 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF680Q8NEM1 530 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 OR11G2Q8NGC1 345 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ZDHHC1Q8WTX9 485 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 MAP6Q96JE9 813 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 ZNF578Q96N58 590 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 TSSK2Q96PF2 358 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 LMF1Q96S06 567 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 CCNL2Q96S94 520 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 TSPAN10Q9H1Z9 355 aaPredicted RBP10.1□□□□□ -0.79
HDAC9-228ENST00000524023 HEXA-AS1Q9H8Q6 139 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 LIN7BQ9HAP6 207 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 NKIRAS2Q9NYR9 191 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 EMC3Q9P0I2 261 aa10.1□□□□□ -0.79
HDAC9-228ENST00000524023 HIF3AQ9Y2N7 669 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms