RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DGCR6Q14129 220 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TRAM2Q15035 370 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 IQCCQ4KMZ1 466 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 GLYATQ6IB77 296 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 WDR88Q6ZMY6 472 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 SLC46A3Q7Z3Q1 461 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 CXorf67Q86X51 503 aaPredicted RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TMEM123Q8N131 208 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 C7orf34Q96L11 122 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 FUZQ9BT04 418 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 SLCO5A1Q9H2Y9 848 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 CRNNQ9UBG3 495 aaPredicted RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 SNX13Q9Y5W8 968 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 KLF4O43474 513 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TRAF3IP2O43734 574 aaPredicted RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 RAMP1O60894 148 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 GMNNO75496 209 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 ADAP00813 363 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 RHCEP18577 417 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 IGHV1-2P23083 117 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TRAP1Q12931 704 aaKnown RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 HIST2H2BCQ6DN03 193 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 TMEM225Q6GV28 225 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 LCN8Q6JVE9 175 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 RBM45Q8IUH3 476 aaKnown RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 IGFBPL1Q8WX77 278 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 KISS1RQ969F8 398 aaPredicted RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 CXXC4Q9H2H0 198 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 ASB6Q9NWX5 421 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 CLEC4AQ9UMR7 237 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 PRRC2CQ9Y520 2896 aaKnown RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 OR5H1A6NKK0 313 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 CPSF4LA6NMK7 179 aaKnown RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 M0R082 166 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 CASKO14936 926 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 AHCYL1O43865 530 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 OR7A10O76100 309 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 SERPINA1P01009 418 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 SMIM11AP58511 58 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TAS2R41P59536 307 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 RPS4XP62701 263 aaKnown RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 TGFBR3Q03167 851 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 GABRA6Q16445 453 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 FAM205BPQ63HN1 556 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TMPRSS11FQ6ZWK6 438 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 AAED1Q7RTV5 226 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TSEN54Q7Z6J9 526 aaKnown RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 CCDC103Q8IW40 242 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 OR6X1Q8NH79 312 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 ZNF417Q8TAU3 575 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TMEM239Q8WW34 195 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 PYURFQ96I23 114 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 RADILQ96JH8 1075 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 ZNF587Q96SQ5 575 aaPredicted RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 ACTR6Q9GZN1 396 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 PLEKHF2Q9H8W4 249 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MAN2C1Q9NTJ4 1040 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 PRSS50Q9UI38 385 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MGAT4BQ9UQ53 548 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 TMEM5Q9Y2B1 443 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MAGED1Q9Y5V3 778 aaPredicted RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 DOPEY2Q9Y3R5 2298 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 ENTPD5O75356 428 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 SLC43A1O75387 559 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MAGEA2P43356 314 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 PUDPQ08623 228 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 HIST3H3Q16695 136 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 LRRC23Q53EV4 343 aaPredicted RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 TRPM8Q7Z2W7 1104 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 DPPA2Q7Z7J5 298 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 ACOT11Q8WXI4 607 aaPredicted RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 FAM162AQ96A26 154 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 ZNF347Q96SE7 839 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MEPEQ9NQ76 525 aaPredicted RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 MED31Q9Y3C7 131 aa8.34□□□□□ -1.07
CLK4-209ENST00000521621 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.07
CLK4-209ENST00000521621 ZNF43P17038 809 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 CCNA2P20248 432 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 HMGA2P52926 109 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 NCMAPQ5T1S8 102 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 C20orf204Q6ZNR8 217 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 MBOAT2Q6ZWT7 520 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 UEVLDQ8IX04 471 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 LINC00471Q8N535 108 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 VANGL1Q8TAA9 524 aaPredicted RBP8.33□□□□□ -1.08
CLK4-209ENST00000521621 LINC01560Q8TB33 94 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 FNDC8Q8TC99 324 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 SGTBQ96EQ0 304 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 OR2M2Q96R28 347 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 CDRT15Q96T59 188 aa8.33□□□□□ -1.08
CLK4-209ENST00000521621 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms