RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 OR6N2Q8NGY6 317 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 RAB40AQ8WXH6 277 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 NSMAFQ92636 917 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRSS27Q9BQR3 290 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 REG4Q9BYZ8 158 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 AICDAQ9GZX7 198 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
TRAPPC9-208ENST00000520857 ASCC3Q8N3C0 2202 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRICKLE3O43900 615 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZFPL1O95159 310 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 LDOC1O95751 146 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 EPCAMP16422 314 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 CAPZA2P47755 286 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SKP1P63208 163 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SLC25A38Q96DW6 304 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 LINC00615Q96LM1 132 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 NPAS1Q99742 590 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 COMMD4Q9H0A8 199 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZMAT3Q9HA38 289 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 RNF215Q9Y6U7 377 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 PLXNB3Q9ULL4 1909 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 IGKV1-8A0A0C4DH67 115 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 A0A1B0GTH9 108 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 G3V3Q6 166 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 KLF4O43474 513 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 AMY2AP04746 511 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 TACSTD2P09758 323 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 VSIG10L2P0DP72 767 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 NID1P14543 1247 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 VAMP1P23763 118 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 VIPR2P41587 438 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 H2BFSP57053 126 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 RPS15P62841 145 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 C2orf68Q2NKX9 166 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 FAM199XQ6PEV8 388 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 OR2L3Q8NG85 312 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 MEPEQ9NQ76 525 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 FOXJ3Q9UPW0 622 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 ZNF175Q9Y473 711 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 ANKRD20A5PA0PJZ0 165 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SNRPGP15A8MWD9 76 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SLC31A1O15431 190 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 GPRIN2O60269 458 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 B3GALNT1O75752 331 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 ADH1CP00326 375 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 C12orf40Q86WS4 652 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 CCDC107Q8WV48 283 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 C12orf57Q99622 126 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 FAM83CQ9BQN1 747 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 IL21RQ9HBE5 538 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 NPTNQ9Y639 398 aa11.78□□□□□ -0.52
TRAPPC9-208ENST00000520857 MCIDASD6RGH6 385 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 M0QYG6 137 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 WDPCPO95876 746 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 HPGDP15428 266 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 PRSS3P35030 304 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNHIT3Q15649 155 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR7E24Q6IFN5 339 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 PWWP2BQ6NUJ5 590 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 KCTD9Q7L273 389 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR4D10Q8NGI6 311 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR5M9Q8NGP3 310 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 C15orf40Q8WUR7 153 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMEM106AQ96A25 262 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 CPNE2Q96FN4 548 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 PRELID3BQ9Y3B1 194 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 SEC16AO15027 2179 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 H7C1C5 153 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 J3QRE1 110 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 CD3DP04234 171 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF806P0C7X5 589 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 LCN6P62502 163 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 HNRNPA1L2Q32P51 320 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 ELFN2Q5R3F8 820 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 SAMD14Q8IZD0 417 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 LINC00518Q8N0U6 118 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 POMGNT2Q8NAT1 580 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 C2CD4CQ8TF44 421 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 PTDSS2Q9BVG9 487 aa11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 PITHD1Q9GZP4 211 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 ING1Q9UK53 422 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-208ENST00000520857 CTDSPLO15194 276 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CPN1P15169 458 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CCKBRP32239 447 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 DUSP8Q13202 625 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF660Q6AZW8 331 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms