RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF578Q96N58 590 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 FOXN4Q96NZ1 517 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MCEEQ96PE7 176 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 RNF157Q96PX1 679 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TNFRSF13CQ96RJ3 184 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SECISBP2Q96T21 854 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 S1PR3Q99500 378 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINI1Q99574 410 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 KLF6Q99612 283 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPAG8Q99932 426 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM246Q9BRR3 403 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CNPY3Q9BT09 278 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 KIFC1Q9BW19 673 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 FTHL17Q9BXU8 183 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF717Q9BY31 904 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SMYD3Q9H7B4 428 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 LRRC40Q9H9A6 602 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 VPS37BQ9H9H4 285 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 NTN4Q9HB63 628 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TM9SF3Q9HD45 589 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 HMG20AQ9NP66 347 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 C8orf4Q9NR00 106 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DIABLOQ9NR28 239 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLSCR3Q9NRY6 295 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCAF16Q9NXF7 216 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 B3GNT2Q9NY97 397 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM216Q9P0N5 145 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MTRRQ9UBK8 725 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYTH4Q9UIA0 394 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATPIF1Q9UII2 106 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPATA2Q9UM82 520 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACOT9Q9Y305 439 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CACNG2Q9Y698 323 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MIA3Q5JRA6 1907 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF638Q14966 1978 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SIP14410 1827 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DOCK1Q14185 1865 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 KIAA1217Q5T5P2 1943 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ALPK3Q96L96 1907 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ADAMTSL1Q8N6G6 1762 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 A0A0A6YYC8 382 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRBV5-4A0A0C4DH59 114 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 LINC00854A0A1B0GVQ3 168 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 A0A1B0GVY2 172 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PRORSD1PA6NEY8 169 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC15A5A6NIM6 579 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SAGE2PA6NJ88 616 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 A8MX80 341 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 HACD1B0YJ81 288 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRIM49D1C9J1S8 452 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 I3L1I5 382 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 I3L4J1 428 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SGK1O00141 431 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 UPK1AO00322 258 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 TOR1AO14656 332 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 HDAC3O15379 428 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 YKT6O15498 198 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 B4GAT1O43505 415 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 KIAA0513O60268 411 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF780AO75290 641 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 GMNNO75496 209 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 LYPLA1O75608 230 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 B3GALNT1O75752 331 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 CNMDO75829 334 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZMPSTE24O75844 475 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PIAS1O75925 651 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 RHOBTB1O94844 696 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR6A2O95222 327 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNAPINO95295 136 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PAHP00439 452 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 CALCAP01258 141 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINE1P05121 402 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 RETP07949 1114 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SBK2P0C263 348 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PRKACAP17612 351 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 GATA2P23769 480 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 CRHBPP24387 322 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSMA2P25787 234 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 TNFSF9P41273 254 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ELK3P41970 407 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 GNPDA1P46926 289 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 HAAOP46952 286 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 NPY2RP49146 381 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ETV1P50549 477 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 HMGCS2P54868 508 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 DSCR10P59022 87 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 GABARAPL2P60520 117 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 COPZ1P61923 177 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 OTUD4Q01804 1114 aaKnown RBP2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACY1Q03154 408 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 PRKCDQ05655 676 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF33BQ06732 778 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 MERTKQ12866 999 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 BNIP2Q12982 314 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 FADDQ13158 208 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZBTB6Q15916 424 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 DPYSL2Q16555 572 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 SGCBQ16585 318 aa2.62□□□□□ -1.99
HMGB1P41-201ENST00000520234 NRF1Q16656 503 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms