RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 P2RY13Q9BPV8 354 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 EBF4Q9BQW3 602 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 RANBP3Q9H6Z4 567 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 HOXC10Q9NYD6 342 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 CD274Q9NZQ7 290 aa3.88□□□□□ -1.79
HMGB1P46-201ENST00000520062 RALGAPA1Q6GYQ0 2036 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 TRBV11-1A0A0K0K1C0 115 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 SMCO3A2RU48 225 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 EPOPA6NHQ4 379 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 H0YIV9 168 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 TNFSF11O14788 317 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 PHOX2AO14813 284 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF780AO75290 641 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 CDH16O75309 829 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 FTH1P02794 183 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 CT62P0C5K7 136 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 ATP6V1B2P21281 511 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 GLP1RP43220 463 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 ARRB1P49407 418 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 FBXW4P57775 412 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 TGFBIQ15582 683 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC1A5Q15758 541 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 CENPQQ7L2Z9 268 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC26A11Q86WA9 606 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 MFSD6LQ8IWD5 586 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 C6orf223Q8N319 242 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF578Q96N58 590 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 SH3GL1Q99961 368 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 ACTR6Q9GZN1 396 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 GBA3Q9H227 469 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 TMEM185BQ9H7F4 350 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 LY9Q9HBG7 655 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 IL26Q9NPH9 171 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 B4GALT7Q9UBV7 327 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 CLEC4EQ9ULY5 219 aa3.87□□□□□ -1.79
HMGB1P46-201ENST00000520062 NSG1A0A0A6YYJ2 146 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 A6NIZ1 184 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR2AG2A6NM03 316 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 SOX15O60248 233 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 CTAG2O75638 210 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ASGR1P07306 291 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 FGF4P08620 206 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 UBTFL1P0CB47 393 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ANXA8P13928 327 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 CXCR2P25025 360 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 GSSP48637 474 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 DLX1P56177 255 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 RAP1BP61224 184 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 SELENOTP62341 195 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 CSNK1G2P78368 415 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 IGLV3-21P80748 117 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF763Q0D2J5 394 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ARHGAP19Q14CB8 494 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 KYAT1Q16773 422 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 C1orf100Q5SVJ3 147 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ANXA8L1Q5VT79 327 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 Q6ZN92 141 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF571Q7Z3V5 609 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 TMEM179BQ7Z7N9 219 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 PIANPQ8IYJ0 282 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 C14orf178Q8N769 122 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 B3GNT7Q8NFL0 401 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 PLPPR1Q8TBJ4 325 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 C7orf33Q8WU49 177 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 PIBF1Q8WXW3 757 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 OR8B4Q96RC9 309 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 SORT1Q99523 831 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 KCTD14Q9BQ13 255 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF160Q9HCG1 818 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 GLRX2Q9NS18 164 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 TNFRSF19Q9NS68 423 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC7A10Q9NS82 523 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 KCNIP1Q9NZI2 227 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 ASF1AQ9Y294 204 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 CDHR2Q9BYE9 1310 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 TNRQ92752 1358 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 NINLQ9Y2I6 1382 aa3.86□□□□□ -1.79
HMGB1P46-201ENST00000520062 SERTM2A0A1B0GWG4 89 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 LRRIQ4A6NIV6 560 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZFP92A6NM28 416 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 DYNC1I1O14576 645 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 CASQ2O14958 399 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 TIMP1P01033 207 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 IGHV2-5P01817 119 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 ABOP16442 354 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 TFPI2P48307 235 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 C21orf59P57076 290 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 RGS8P57771 180 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 RPS15P62841 145 aaKnown RBP3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 MRPS22P82650 360 aaKnown RBP3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC8B1Q6J4K2 584 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 TMIGD1Q6UXZ0 262 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF546Q86UE3 836 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 CCDC148Q8NFR7 591 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 FAM81AQ8TBF8 368 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 FGF14Q92915 247 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 B3GALT6Q96L58 329 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 MS4A4EQ96PG1 132 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 TECTBQ96PL2 329 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 RACGAP1Q9H0H5 632 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms