RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 OR2J2O76002 312 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CLPXO76031 633 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 KDM4BO94953 1096 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 WDPCPO95876 746 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 LGI1O95970 557 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CT62P0C5K7 136 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MED14OSP0DP75 135 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 PRPS2P11908 318 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 APEHP13798 732 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 DDX5P17844 614 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 EFNA1P20827 205 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 CDAP32320 146 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 RPL3P39023 403 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 SSR4P51571 173 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 AQP5P55064 265 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 DIO3P55073 304 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MLF1P58340 268 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 IGLV3-21P80748 117 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 PPP2R2BQ00005 443 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 KLRB1Q12918 225 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 HSPB3Q12988 150 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MFAP5Q13361 173 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 PTGR1Q14914 329 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 EXOSC7Q15024 291 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 KIAA0040Q15053 153 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 AANATQ16613 207 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SPDYE7PQ495Y7 208 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 GXYLT1Q4G148 440 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CDONQ4KMG0 1287 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 TRMT12Q53H54 448 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 SOWAHCQ53LP3 525 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 XKR7Q5GH72 579 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 PHYHD1Q5SRE7 291 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CPTPQ5TA50 214 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SPINK14Q6IE38 97 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 OR7E24Q6IFN5 339 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 FAM71E1Q6IPT2 247 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ERICH5Q6P6B1 374 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ZNF600Q6ZNG1 722 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 RNF165Q6ZSG1 346 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SLC29A4Q7RTT9 530 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 BIVMQ86UB2 503 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 HAPLN4Q86UW8 402 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 TPRA1Q86W33 373 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 BEST3Q8N1M1 668 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 TMEM156Q8N614 296 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 KRTCAP2Q8N6L1 136 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 HORMAD2Q8N7B1 307 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 FADS6Q8N9I5 356 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 APCDD1LQ8NCL9 501 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 DNAAF1Q8NEP3 725 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 BBS1Q8NFJ9 593 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 OR7A2PQ8NGA2 310 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 OR52R1Q8NGF1 315 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 OR9A2Q8NGT5 310 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 OR14L1PQ8NHC6 308 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SLC22A8Q8TCC7 542 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ZNF721Q8TF20 911 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 PSMF1Q92530 271 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CIDECQ96AQ7 238 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 RASD2Q96D21 266 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ORAI1Q96D31 301 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CNRIP1Q96F85 164 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 METTL2AQ96IZ6 378 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 LCORQ96JN0 433 aaPredicted RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 MARK4Q96L34 752 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MAGEB18Q96M61 343 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 RILPQ96NA2 401 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD27Q96NW4 1050 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 LMF1Q96S06 567 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 NEU1Q99519 415 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CITED1Q99966 193 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SF3B5Q9BWJ5 86 aaKnown RBP2.5□□□□□ -2.01
SKP1-204ENST00000517691 DPY30Q9C005 99 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 SIRPDQ9H106 197 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 REEP4Q9H6H4 257 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MED20Q9H944 212 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ANKRA2Q9H9E1 313 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 MEAF6Q9HAF1 191 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 TREM1Q9NP99 234 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 KLHL1Q9NR64 748 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 YAE1D1Q9NRH1 226 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 UPB1Q9UBR1 384 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ERVK-11Q9UQG0 969 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 B3GNT3Q9Y2A9 372 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 USH1CQ9Y6N9 552 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 KALRNO60229 2985 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 ZFYVE26Q68DK2 2539 aa2.5□□□□□ -2.01
SKP1-204ENST00000517691 TRAV17A0A0B4J275 112 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 A0A0U1RQV5 110 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PQ72 361 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PRB8 838 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR5H15A6NDH6 313 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 KRTAP29-1A8MX34 341 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 AHRRA9YTQ3 701 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 C9JVG2 144 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NPIPB8E9PQR5 432 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SDHDO14521 159 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms