RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF275Q9NSD4 429 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 DDX28Q9NUL7 540 aaKnown RBP9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 TREM2Q9NZC2 230 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 TBK1Q9UHD2 729 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 RASD1Q9Y272 281 aa9.86□□□□□ -0.83
TRAPPC9-203ENST00000517667 CFAP73A6NFT4 308 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 CLDN24A6NM45 220 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RNASET2O00584 256 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RIPK2O43353 540 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 PPIHO43447 177 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 UPK3AO75631 287 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 HPXP02790 462 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 COL8A2P25067 703 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 LMO4P61968 165 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RPS23P62266 143 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 GSTA3Q16772 222 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 UGT3A2Q3SY77 523 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 MIDNQ504T8 468 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 XKR7Q5GH72 579 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 IL23RQ5VWK5 629 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ACSM5Q6NUN0 579 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 C1orf229Q6ZS94 237 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 LINGO2Q7L985 606 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 CARM1Q86X55 608 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RIBC1Q8N443 379 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZDHHC22Q8N966 263 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 FNDC5Q8NAU1 212 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 CNOT9Q92600 299 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZG16BQ96DA0 208 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RAB39BQ96DA2 213 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 MRPL37Q9BZE1 423 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF385DQ9H6B1 395 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZMAT3Q9HA38 289 aaKnown RBP9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 ADPRHL2Q9NX46 363 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 GIMAP2Q9UG22 337 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 RCE1Q9Y256 329 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 NOX1Q9Y5S8 564 aa9.85□□□□□ -0.83
TRAPPC9-203ENST00000517667 A0A096LPI6 279 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 A0A1W2PPM1 405 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 A8MVM7 634 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 TMEM233B4DJY2 109 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 WNT9BO14905 357 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 TRIM13O60858 407 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 SLC43A1O75387 559 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 AVPP01185 164 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 CHRM4P08173 479 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 GATA3P23771 443 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 FPR2P25090 351 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 GLRXP35754 106 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 CAPZA2P47755 286 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 P2RY4P51582 365 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ARF1P84077 181 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 FUT5Q11128 374 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 MAD2L1Q13257 205 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 PGS1Q32NB8 556 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 GPAT3Q53EU6 434 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 C6orf136Q5SQH8 315 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 TNFAIP8L2Q6P589 184 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 RBMS3Q6XE24 437 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 MDP1Q86V88 176 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 EPHX4Q8IUS5 362 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 C10orf107Q8IVU9 208 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF440Q8IYI8 595 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 CLECL1Q8IZS7 167 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 CLEC4FQ8N1N0 589 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 OR4A15Q8NGL6 344 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 RAB8BQ92930 207 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 GATA5Q9BWX5 397 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF665Q9H7R5 613 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF446Q9NWS9 450 aa9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 ZNF346Q9UL40 294 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-203ENST00000517667 AGAP5A6NIR3 686 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 TMEM229AB2RXF0 380 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 COPEO14579 308 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 FRS3O43559 492 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 NPHS1O60500 1241 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 ZNF432O94892 652 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 MPZL1O95297 269 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 NUDT17P0C025 328 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 FAM153BP0C7A2 387 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 IL7RP16871 459 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 UQCRC2P22695 453 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 CLDN8P56748 225 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 COPZ1P61923 177 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 GALK2Q01415 458 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 EPS8Q12929 822 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 PCLAFQ15004 111 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 TRMT5Q32P41 509 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 DCAF12L2Q5VW00 463 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 OR4F3Q6IEY1 312 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 HMGN2P46Q86SG4 172 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 GPR137CQ8N3F9 429 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 VPS37AQ8NEZ2 397 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 OR8J2Q8NGG1 315 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 YIPF5Q969M3 257 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 NEURL3Q96EH8 262 aa9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 TRNT1Q96Q11 434 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-203ENST00000517667 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms