RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 NRBF2Q96F24 287 aa8.8□□□□□ -1
CLN8-202ENST00000517514 FEVQ99581 238 aa8.8□□□□□ -1
CLN8-202ENST00000517514 VKORC1Q9BQB6 163 aa8.8□□□□□ -1
CLN8-202ENST00000517514 TAPBPLQ9BX59 468 aa8.8□□□□□ -1
CLN8-202ENST00000517514 DGCR6LQ9BY27 220 aa8.8□□□□□ -1
CLN8-202ENST00000517514 KLHL4Q9C0H6 718 aa8.8□□□□□ -1
CLN8-202ENST00000517514 GABARAPL1Q9H0R8 117 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SMURF2Q9HAU4 748 aa8.8□□□□□ -1
CLN8-202ENST00000517514 NANSQ9NR45 359 aa8.8□□□□□ -1
CLN8-202ENST00000517514 PAQR5Q9NXK6 330 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 PDP1Q9P0J1 537 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 Q9UFV3 132 aa8.8□□□□□ -1
CLN8-202ENST00000517514 TMEFF2Q9UIK5 374 aaPredicted RBP8.8□□□□□ -1
CLN8-202ENST00000517514 TMCC3Q9ULS5 477 aa8.8□□□□□ -1
CLN8-202ENST00000517514 CLEC4AQ9UMR7 237 aa8.8□□□□□ -1
CLN8-202ENST00000517514 OAZ3Q9UMX2 235 aa8.8□□□□□ -1
CLN8-202ENST00000517514 SIGLEC7Q9Y286 467 aa8.8□□□□□ -1
CLN8-202ENST00000517514 HIF3AQ9Y2N7 669 aa8.8□□□□□ -1
CLN8-202ENST00000517514 LOC102725191A0A1B0GVB3 256 aa8.79□□□□□ -1
CLN8-202ENST00000517514 A0A1W2PNV4 684 aa8.79□□□□□ -1
CLN8-202ENST00000517514 EFCAB9A8MZ26 197 aa8.79□□□□□ -1
CLN8-202ENST00000517514 CCL21O00585 134 aa8.79□□□□□ -1
CLN8-202ENST00000517514 GNGT2O14610 69 aa8.79□□□□□ -1
CLN8-202ENST00000517514 MGRN1O60291 552 aa8.79□□□□□ -1
CLN8-202ENST00000517514 EIF1BO60739 113 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 SS18L1O75177 396 aaPredicted RBP8.79□□□□□ -1
CLN8-202ENST00000517514 TNFSF13O75888 250 aa8.79□□□□□ -1
CLN8-202ENST00000517514 SYNGR4O95473 234 aa8.79□□□□□ -1
CLN8-202ENST00000517514 POU2F1P14859 743 aa8.79□□□□□ -1
CLN8-202ENST00000517514 TIMP3P35625 211 aa8.79□□□□□ -1
CLN8-202ENST00000517514 RPL18Q07020 188 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 RASGEF1BQ0VAM2 473 aa8.79□□□□□ -1
CLN8-202ENST00000517514 PMPCAQ10713 525 aa8.79□□□□□ -1
CLN8-202ENST00000517514 TSPAN31Q12999 210 aa8.79□□□□□ -1
CLN8-202ENST00000517514 PDK3Q15120 406 aa8.79□□□□□ -1
CLN8-202ENST00000517514 POU4F3Q15319 338 aa8.79□□□□□ -1
CLN8-202ENST00000517514 RIPPLY2Q5TAB7 128 aa8.79□□□□□ -1
CLN8-202ENST00000517514 KLHL17Q6TDP4 642 aa8.79□□□□□ -1
CLN8-202ENST00000517514 CD300LDQ6UXZ3 194 aa8.79□□□□□ -1
CLN8-202ENST00000517514 MAMDC2Q7Z304 686 aaPredicted RBP8.79□□□□□ -1
CLN8-202ENST00000517514 NUFIP2Q7Z417 695 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 FJX1Q86VR8 437 aa8.79□□□□□ -1
CLN8-202ENST00000517514 CCDC71Q8IV32 467 aaPredicted RBP8.79□□□□□ -1
CLN8-202ENST00000517514 LIX1LQ8IVB5 337 aa8.79□□□□□ -1
CLN8-202ENST00000517514 TUSC5Q8IXB3 177 aa8.79□□□□□ -1
CLN8-202ENST00000517514 GCNT2Q8N0V5 402 aa8.79□□□□□ -1
CLN8-202ENST00000517514 OR9K2Q8NGE7 335 aa8.79□□□□□ -1
CLN8-202ENST00000517514 OR51A7Q8NH64 312 aa8.79□□□□□ -1
CLN8-202ENST00000517514 PRR7Q8TB68 274 aa8.79□□□□□ -1
CLN8-202ENST00000517514 GNPDA2Q8TDQ7 276 aa8.79□□□□□ -1
CLN8-202ENST00000517514 ZNF775Q96BV0 537 aaPredicted RBP8.79□□□□□ -1
CLN8-202ENST00000517514 ZNF385AQ96PM9 386 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 SLC29A1Q99808 456 aa8.79□□□□□ -1
CLN8-202ENST00000517514 BDH2Q9BUT1 245 aa8.79□□□□□ -1
CLN8-202ENST00000517514 PLA2G12AQ9BZM1 189 aa8.79□□□□□ -1
CLN8-202ENST00000517514 BCO1Q9HAY6 547 aa8.79□□□□□ -1
CLN8-202ENST00000517514 TIGARQ9NQ88 270 aa8.79□□□□□ -1
CLN8-202ENST00000517514 MCTS1Q9ULC4 181 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 MGAT4BQ9UQ53 548 aa8.79□□□□□ -1
CLN8-202ENST00000517514 TMEM5Q9Y2B1 443 aa8.79□□□□□ -1
CLN8-202ENST00000517514 B3GALT5Q9Y2C3 310 aa8.79□□□□□ -1
CLN8-202ENST00000517514 RRP15Q9Y3B9 282 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 CORINQ9Y5Q5 1042 aa8.79□□□□□ -1
CLN8-202ENST00000517514 FLVCR1Q9Y5Y0 555 aa8.79□□□□□ -1
CLN8-202ENST00000517514 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
CLN8-202ENST00000517514 USP9XQ93008 2570 aaPredicted RBP8.79□□□□□ -1
CLN8-202ENST00000517514 COL12A1Q99715 3063 aa8.79□□□□□ -1
CLN8-202ENST00000517514 MYO18BQ8IUG5 2567 aa8.78□□□□□ -1
CLN8-202ENST00000517514 ADGRG4Q8IZF6 3080 aa8.78□□□□□ -1
CLN8-202ENST00000517514 CLEC18AA5D8T8 446 aa8.78□□□□□ -1
CLN8-202ENST00000517514 UNC119BA6NIH7 251 aa8.78□□□□□ -1
CLN8-202ENST00000517514 MCIDASD6RGH6 385 aa8.78□□□□□ -1
CLN8-202ENST00000517514 E9PQ18 207 aa8.78□□□□□ -1
CLN8-202ENST00000517514 C11orf98E9PRG8 122 aa8.78□□□□□ -1
CLN8-202ENST00000517514 G3V2T6 193 aa8.78□□□□□ -1
CLN8-202ENST00000517514 SOCS2O14508 198 aa8.78□□□□□ -1
CLN8-202ENST00000517514 LRRTM2O43300 516 aa8.78□□□□□ -1
CLN8-202ENST00000517514 MITFO75030 526 aaPredicted RBP8.78□□□□□ -1
CLN8-202ENST00000517514 E2F6O75461 281 aa8.78□□□□□ -1
CLN8-202ENST00000517514 ZNF432O94892 652 aa8.78□□□□□ -1
CLN8-202ENST00000517514 BAG2O95816 211 aa8.78□□□□□ -1
CLN8-202ENST00000517514 CGAP01215 116 aa8.78□□□□□ -1
CLN8-202ENST00000517514 RNF224P0DH78 156 aa8.78□□□□□ -1
CLN8-202ENST00000517514 SAGP10523 405 aaPredicted RBP8.78□□□□□ -1
CLN8-202ENST00000517514 AGTR1P30556 359 aa8.78□□□□□ -1
CLN8-202ENST00000517514 SLC9A3P48764 834 aa8.78□□□□□ -1
CLN8-202ENST00000517514 PPP2R2BQ00005 443 aa8.78□□□□□ -1
CLN8-202ENST00000517514 PUDPQ08623 228 aa8.78□□□□□ -1
CLN8-202ENST00000517514 PMS2P3Q13401 168 aa8.78□□□□□ -1
CLN8-202ENST00000517514 MFSD13AQ14CX5 517 aa8.78□□□□□ -1
CLN8-202ENST00000517514 ZBED5Q49AG3 693 aa8.78□□□□□ -1
CLN8-202ENST00000517514 C4orf17Q53FE4 359 aa8.78□□□□□ -1
CLN8-202ENST00000517514 KDM4DQ6B0I6 523 aa8.78□□□□□ -1
CLN8-202ENST00000517514 VWA1Q6PCB0 445 aa8.78□□□□□ -1
CLN8-202ENST00000517514 CLEC18BQ6UXF7 455 aa8.78□□□□□ -1
CLN8-202ENST00000517514 ZNF620Q6ZNG0 422 aa8.78□□□□□ -1
CLN8-202ENST00000517514 CREB3L2Q70SY1 520 aa8.78□□□□□ -1
CLN8-202ENST00000517514 CHMP1BQ7LBR1 199 aa8.78□□□□□ -1
CLN8-202ENST00000517514 RRM2BQ7LG56 351 aa8.78□□□□□ -1
CLN8-202ENST00000517514 OAFQ86UD1 273 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms