RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 C18orf63Q68DL7 685 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2T5Q6IEZ7 315 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CAPN13Q6MZZ7 669 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF621Q6ZSS3 439 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TMPRSS7Q7RTY8 843 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PEG10Q86TG7 708 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 FAM89BQ8N5H3 189 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2T29Q8NH02 315 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR1S1Q8NH92 325 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 GPR151Q8TDV0 419 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 POP5Q969H6 163 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 HSH2DQ96JZ2 352 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 INTS14Q96SY0 518 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TPT1P8Q9HAU6 139 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■■■■■ 27
PDLIM5-219ENST00000514743 POT1Q9NUX5 634 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 GAR1Q9NY12 217 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 RNF6Q9Y252 685 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 A0A0A6YYC8 382 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC35F4A4IF30 521 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 I3L1I5 382 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ADAM10O14672 748 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PAPLNO95428 1278 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CPSF4O95639 269 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ADAP00813 363 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ADH5P11766 374 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PNLIPP16233 465 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 AQP1P29972 269 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TIA1P31483 386 aaKnown RBP eCLIP6.89□□□□□ -1.314e-7■■■■■ 27.1
PDLIM5-219ENST00000514743 EVX1P49640 407 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 COMPP49747 757 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 NOVA1P51513 510 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 IL24Q13007 206 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 HNRNPA0Q13151 305 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 INPP5JQ15735 1006 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 KHDRBS2Q5VWX1 349 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 LIPKQ5VXJ0 399 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 LAS2Q8IYD9 372 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 STXBP6Q8NFX7 210 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR4C6Q8NH72 309 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SMPDL3AQ92484 453 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 UPRTQ96BW1 309 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CNN2Q99439 309 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ELF4Q99607 663 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SGPP1Q9BX95 441 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PNO1Q9NRX1 252 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PHF11Q9UIL8 331 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 FBXL4Q9UKA2 621 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 POMT2Q9UKY4 750 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TLX3O43711 291 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TOXO94900 526 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TXNDC12O95881 172 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 AK1P00568 194 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 MT-ND2P03891 347 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 FABP3P05413 133 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ANXA4P09525 319 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 APOBEC3AP31941 199 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ITGA1P56199 1179 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2B8PP59922 312 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 STXBP1P61764 594 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PMP22Q01453 160 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RGNQ15493 299 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ISXQ2M1V0 245 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ODF4Q2M2E3 257 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 SPIN4Q56A73 249 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NCR3LG1Q68D85 454 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 METAP1DQ6UB28 335 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF620Q6ZNG0 422 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 FAM83HQ6ZRV2 1179 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 TMPRSS11BQ86T26 416 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 LRRC28Q86X40 367 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 OR10H4Q8NGA5 316 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 OR10D4PQ8NGN7 298 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 SPPL2AQ8TCT8 520 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC39A7Q92504 469 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 MAL2Q969L2 176 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 MRGPRX1Q96LB2 322 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NOL4LQ96MY1 436 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 DNAJC4Q9NNZ3 241 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 AMBNQ9NP70 447 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ISYNA1Q9NPH2 558 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NANSQ9NR45 359 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 APOBEC3BQ9UH17 382 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ZDHHC8Q9ULC8 765 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 FZD4Q9ULV1 537 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 V9GYH0 126 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 A8MWP6 167 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 BCKDKO14874 412 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 RGS10O43665 173 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 NCR1O76036 304 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 ITGB7P26010 798 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 PSMB6P28072 239 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC6A11P48066 632 aa6.88□□□□□ -1.31
PDLIM5-219ENST00000514743 KEAP1Q14145 624 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms