RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 GIPRP48546 466 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 FNTAP49354 379 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 ZNF81P51508 661 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 EFNB2P52799 333 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 RPS23P62266 143 aaKnown RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 H3F3AP84243 136 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 CBFBQ13951 182 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 HABP2Q14520 560 aaPredicted RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 RAB39AQ14964 217 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 DUSP5Q16690 384 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 GSG1Q2KHT4 349 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 PRSS53Q2L4Q9 553 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 C3orf36Q3SXR2 165 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 VPS26BQ4G0F5 336 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD1-211ENST00000514344 RNASEH2BQ5TBB1 312 aaKnown RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 NOXRED1Q6NXP6 359 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 NIPAL3Q6P499 406 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 C4orf22Q6V702 233 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 FRRS1Q6ZNA5 592 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 ZNF551Q7Z340 670 aaPredicted RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 GOLGA7Q7Z5G4 137 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 SPICQ8N5J4 248 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 COX18Q8N8Q8 333 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 ZIC4Q8N9L1 334 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 OR5W2Q8NH69 310 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 OR2T6Q8NHC8 308 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 RAB40AQ8WXH6 277 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 GATAD2BQ8WXI9 593 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 TFAP2CQ92754 450 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 DPAGT1Q9H3H5 408 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 GLIPR2Q9H4G4 154 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 ELOVL6Q9H5J4 265 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 NOL11Q9H8H0 719 aaKnown RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 CTPS2Q9NRF8 586 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 FBLN5Q9UBX5 448 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 CHRNA9Q9UGM1 479 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 IL20RAQ9UHF4 553 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 GPR160Q9UJ42 338 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 VPREB3Q9UKI3 123 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 POLR3KQ9Y2Y1 108 aaPredicted RBP2.7□□□□□ -1.98
CHD1-211ENST00000514344 FAM96BQ9Y3D0 163 aa2.7□□□□□ -1.98
CHD1-211ENST00000514344 A0A1W2PQD3 144 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CEACAM18A8MTB9 384 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TMEM229AB2RXF0 380 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TNFRSF13BO14836 293 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 ZNF264O43296 627 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ANGPTL7O43827 346 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PMS2P2O95744 297 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 IGHV2-70P01814 119 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 F13BP05160 661 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ACP2P11117 423 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 RPS2P15880 293 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 TSPAN8P19075 237 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 GTF2E2P29084 291 aaKnown RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 AQP5P55064 265 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PAX2Q02962 417 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PRB3Q04118 309 aaPredicted RBP2.69□□□□□ -1.98
CHD1-211ENST00000514344 SLC3A1Q07837 685 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 EGFEM1PQ0D2K5 195 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 IFT88Q13099 833 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 GTF2H2Q13888 395 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 HEPACAMQ14CZ8 416 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ZMYND11Q15326 602 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 RUNDC3AQ59EK9 446 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TCTEX1D4Q5JR98 221 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CDKL4Q5MAI5 379 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 C1QTNF12Q5T7M4 302 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PRAMEF8Q5VWM4 474 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PRAMEF7Q5VXH5 474 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 STEAP4Q687X5 459 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TMEM225Q6GV28 225 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 GTF2H2CQ6P1K8 395 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TMEM99Q8N816 258 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 FAM169BQ8N8A8 192 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 WFDC9Q8NEX5 89 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 OR9K2Q8NGE7 335 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 SYNPRQ8TBG9 265 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 DPF1Q92782 380 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 LHX4Q969G2 390 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ARL8AQ96BM9 186 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TSPAN17Q96FV3 270 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CDADC1Q9BWV3 514 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TRIM15Q9C019 465 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 LAT2Q9GZY6 243 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 HHATLQ9HCP6 504 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 MIEF1Q9NQG6 463 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ADPRHL2Q9NX46 363 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 TMEM181Q9P2C4 612 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 KIF17Q9P2E2 1029 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 CHMP2BQ9UQN3 213 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ADARB2-AS1A8MUL3 147 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 A8MXK9 166 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PCDH7O60245 1069 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 NKX2-2O95096 273 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 ZFPL1O95159 310 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 PDYNP01213 254 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 IGHV1-46P01743 117 aa2.69□□□□□ -1.98
CHD1-211ENST00000514344 KRT14P02533 472 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms