RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 HSPB2A8KAH6 182 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 C11orf98E9PRG8 122 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 C19orf84I3L1E1 186 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 TNFRSF11BO00300 401 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 DNPH1O43598 174 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 OR7A10O76100 309 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 IGHV3-9P01782 118 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 SAGP10523 405 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 CTSSP25774 331 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 FKBP2P26885 142 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 CTBP2P56545 445 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 PMS2P3Q13401 168 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 HSPB2Q16082 182 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 C4orf46Q504U0 113 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM201Q5SNT2 666 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 MTFR2Q6P444 385 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 C5orf46Q6UWT4 87 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 MBOAT2Q6ZWT7 520 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 FAM214BQ7L5A3 538 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 PIWIL3Q7Z3Z3 882 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 NANOGNBQ7Z5D8 188 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 IGFN1Q86VF2 1251 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 WDFY1Q8IWB7 410 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF808Q8N4W9 903 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 OR4K5Q8NGD3 323 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 OR9K2Q8NGE7 335 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 OR4C15Q8NGM1 316 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 MOSPD2Q8NHP6 518 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 PIGXQ8TBF5 258 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 CA5BP1Q8WTZ4 195 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 PYDC1Q8WXC3 89 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 STARD4Q96DR4 205 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 GMPPAQ96IJ6 420 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 ALPK1Q96QP1 1244 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF347Q96SE7 839 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 GPA33Q99795 319 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 NAA11Q9BSU3 229 aaPredicted RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 FUZQ9BT04 418 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 SFXN3Q9BWM7 321 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 ASPNQ9BXN1 380 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC19A3Q9BZV2 496 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 NANSQ9NR45 359 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 B3GAT1Q9P2W7 334 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 PRSS50Q9UI38 385 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 SAMHD1Q9Y3Z3 626 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 LYVE1Q9Y5Y7 322 aa8.71□□□□□ -1.02
TOPBP1-209ENST00000513818 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 A0A1W2PRQ8 180 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 SH3PXD2BA1X283 911 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 WIPF3A6NGB9 483 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CDC42EP2O14613 210 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 DVL2O14641 736 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR2T1O43869 369 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR10H3O60404 316 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 EIF1BO60739 113 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 FZD7O75084 574 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CLDN1O95832 211 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CST1P01037 141 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ASAH2BP0C7U1 165 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ADORA3P0DMS8 318 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 AHCYP23526 432 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 NTF4P34130 210 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 LIMS1P48059 325 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 POU3F1Q03052 451 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 PRKCDQ05655 676 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 LGALS3BPQ08380 585 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 DGCR6Q14129 220 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 MELKQ14680 651 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC17A1Q14916 467 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 RNPS1Q15287 305 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 HIST2H2BCQ6DN03 193 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM225Q6GV28 225 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR2T5Q6IEZ7 315 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CASP12Q6UXS9 341 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 YTHDF3Q7Z739 585 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 TMEM179BQ7Z7N9 219 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 EPHX4Q8IUS5 362 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 HS3ST5Q8IZT8 346 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 SLC43A2Q8N370 569 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR6K3Q8NGY3 331 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR2T29Q8NH02 315 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR5J2Q8NH18 312 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 OR51A7Q8NH64 312 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ASB5Q8WWX0 329 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 BPIFA2Q96DR5 249 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 HS6ST2Q96MM7 605 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ZFP3Q96NJ6 502 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 RAB3IPQ96QF0 476 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 KLHL4Q9C0H6 718 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ANKRD19PQ9H560 264 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 DENND2DQ9H6A0 471 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 REEP1Q9H902 201 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 FKRPQ9H9S5 495 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 BCO1Q9HAY6 547 aa8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 CCM2LQ9NUG4 571 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 MRPL39Q9NYK5 338 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-209ENST00000513818 ZNF229Q9UJW7 825 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms