RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 UTP20O75691 2785 aaKnown RBP10.08□□□□□ -0.8
HTT-213ENST00000513806 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 PLPP3O14495 311 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 OR2T1O43869 369 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 FZD7O75084 574 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 E2F6O75461 281 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 TNFSF13O75888 250 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 CCNB2O95067 398 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 AGFG2O95081 481 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 GASTP01350 101 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 IGHV3-9P01782 118 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 F13BP05160 661 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 HOXD4P09016 255 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 ADORA3P0DMS8 318 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 AHCYP23526 432 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 AGTR1P30556 359 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 TIMP3P35625 211 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 CTBP2P56545 445 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 SMIM11AP58511 58 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 RPL18Q07020 188 aaKnown RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 MELKQ14680 651 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 GUSBP1Q15486 140 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 EEF1A1P5Q5VTE0 462 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 TMEM225Q6GV28 225 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 TMEM211Q6ICI0 200 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 C5orf46Q6UWT4 87 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 MAMDC2Q7Z304 686 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 NANOGNBQ7Z5D8 188 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 EPHX4Q8IUS5 362 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 ZIC4Q8N9L1 334 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 AQP11Q8NBQ7 271 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 OR10G2Q8NGC3 310 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 OR9K2Q8NGE7 335 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 GTPBP3Q969Y2 492 aaKnown RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 TXNDC15Q96J42 360 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 NIPSNAP1Q9BPW8 284 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 EMC6Q9BV81 110 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 SLC19A3Q9BZV2 496 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 KLHL4Q9C0H6 718 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 ANKRD19PQ9H560 264 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 FKRPQ9H9S5 495 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 S100A14Q9HCY8 104 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 PAQR5Q9NXK6 330 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 MRPL39Q9NYK5 338 aaKnown RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 PDP1Q9P0J1 537 aaPredicted RBP10.07□□□□□ -0.8
HTT-213ENST00000513806 DNAJB9Q9UBS3 223 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 PRSS50Q9UI38 385 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 ZNF229Q9UJW7 825 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 PRR14LQ5THK1 2151 aa10.07□□□□□ -0.8
HTT-213ENST00000513806 COL12A1Q99715 3063 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 RNF13O43567 381 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 EIF1BO60739 113 aaKnown RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 SS18L1O75177 396 aaPredicted RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 SMNDC1O75940 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
HTT-213ENST00000513806 BAG2O95816 211 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 MT-ATP6P00846 226 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 LDLRP01130 860 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 HIST1H2ABP04908 130 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 FCGR2AP12318 317 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 FASP25445 335 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 CTSSP25774 331 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 HMGA2P52926 109 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 CLDN17P56750 224 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 FXYD6P3P58550 94 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 POU3F1Q03052 451 aaPredicted RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 DBPQ10586 325 aaPredicted RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 SNTB1Q13884 538 aaKnown RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 SLC17A1Q14916 467 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 SF3B4Q15427 424 aaKnown RBP eCLIP10.06□□□□□ -0.87e-7■■■■□ 24
HTT-213ENST00000513806 ATP6AP1Q15904 470 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 MICAQ29983 383 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 CARD17Q5XLA6 110 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 HIST3H2AQ7L7L0 130 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 MRGPRGQ86SM5 289 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 LUZP2Q86TE4 346 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 KIF18BQ86Y91 864 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 ICA1LQ8NDH6 482 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 OR6S1Q8NH40 331 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 GIPC3Q8TF64 312 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 HIST1H2ACQ93077 130 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 STARD4Q96DR4 205 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 GMPPAQ96IJ6 420 aaPredicted RBP10.06□□□□□ -0.8
HTT-213ENST00000513806 EGLN3Q9H6Z9 239 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 YY1AP1Q9H869 796 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 MCCC2Q9HCC0 563 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 MED29Q9NX70 200 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 KLHL9Q9P2J3 617 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 FLVCR1Q9Y5Y0 555 aa10.06□□□□□ -0.8
HTT-213ENST00000513806 DOPEY2Q9Y3R5 2298 aa10.05□□□□□ -0.8
HTT-213ENST00000513806 UNC119BA6NIH7 251 aa10.05□□□□□ -0.8
HTT-213ENST00000513806 HSPB2A8KAH6 182 aa10.05□□□□□ -0.8
HTT-213ENST00000513806 EEF1E1-BLOC1S5C9J1V9 151 aa10.05□□□□□ -0.8
HTT-213ENST00000513806 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms