RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MAP3K8P41279 467 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 ASMTP46597 345 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TUBA1BP68363 451 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TUBA4AP68366 448 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 KLF10Q13118 480 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 HEPACAMQ14CZ8 416 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 PDK3Q15120 406 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 KLF17Q5JT82 389 aaPredicted RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 SPANXN4Q5MJ08 99 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TSPO2Q5TGU0 170 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 DCAF12L2Q5VW00 463 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 ANKRD16Q6P6B7 361 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 BRICD5Q6PL45 260 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 C17orf107Q6ZR85 190 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 IKBIPQ70UQ0 350 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TUBA1AQ71U36 451 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 ASRGL1Q7L266 308 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 MTDHQ86UE4 582 aaKnown RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 TREML1Q86YW5 311 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 MIER2Q8N344 545 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 GPR119Q8TDV5 335 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 JADE3Q92613 823 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 CIDECQ96AQ7 238 aaPredicted RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 CCDC106Q9BWC9 280 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 QRSL1Q9H0R6 528 aaKnown RBP7.82□□□□□ -1.16
NUP54-211ENST00000512151 C7orf69Q9H7B7 122 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 ZNF442Q9H7R0 627 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 TAS2R7Q9NYW3 318 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 ZIM2Q9NZV7 527 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 EMC3Q9P0I2 261 aa7.82□□□□□ -1.16
NUP54-211ENST00000512151 SLC22A31A6NKX4 558 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CLDN34H7C241 214 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 TIMM23O14925 209 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 MGRN1O60291 552 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 HNRNPCL1O60812 293 aaKnown RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 NCR1O76036 304 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 KCNH1O95259 989 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 WNT11O96014 354 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CRYAAP02489 173 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CELA3BP08861 270 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 NQO1P15559 274 aaKnown RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 CDH2P19022 906 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 ACHEP22303 614 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 FRKP42685 505 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 DIO1P49895 249 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 NCBP2P52298 156 aaKnown RBP eCLIP7.81□□□□□ -1.16
NUP54-211ENST00000512151 ELF3P78545 371 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 RELBQ01201 579 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 SELENBP1Q13228 472 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 RIPK1Q13546 671 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 PGS1Q32NB8 556 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 AGKQ53H12 422 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 ZNF311Q5JNZ3 666 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 AVPI1Q5T686 147 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 FAM91A1Q658Y4 838 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 OR4F3Q6IEY1 312 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 SPATC1Q76KD6 591 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CCDC103Q8IW40 242 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 NUP37Q8NFH4 326 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 FBXO30Q8TB52 745 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 GPR151Q8TDV0 419 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 RDH5Q92781 318 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 HOXB13Q92826 284 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 SLC25A28Q96A46 364 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 TESCQ96BS2 214 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 PPCDCQ96CD2 204 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 MTERF3Q96E29 417 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 DNAJA3Q96EY1 480 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 KCNS3Q9BQ31 491 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 RSPO3Q9BXY4 272 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 GLIPR2Q9H4G4 154 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 EQTNQ9NQ60 294 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CCDC167Q9P0B6 97 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 SH3BP4Q9P0V3 963 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CRNNQ9UBG3 495 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 CARD8Q9Y2G2 431 aa7.81□□□□□ -1.16
NUP54-211ENST00000512151 GPC6Q9Y625 555 aaPredicted RBP7.81□□□□□ -1.16
NUP54-211ENST00000512151 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 FAM181BA6NEQ2 426 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 NR5A2O00482 541 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 MRPL33O75394 65 aaKnown RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 KCNK2O95069 426 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 NKX2-2O95096 273 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 NUDT14O95848 222 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 C1QCP02747 245 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 ACP2P11117 423 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 MPIP34949 423 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 POLR2JP52435 117 aaKnown RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 TMEM33P57088 247 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 STX1BP61266 288 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 FAM189A2Q15884 450 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 SLC25A53Q5H9E4 307 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 CCNJQ5T5M9 372 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 OLFML2AQ68BL7 652 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 CCBE1Q6UXH8 406 aaPredicted RBP7.8□□□□□ -1.16
NUP54-211ENST00000512151 CASP12Q6UXS9 341 aa7.8□□□□□ -1.16
NUP54-211ENST00000512151 TMPPEQ6ZT21 453 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms