RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 TAPBPLQ9BX59 468 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 MUC13Q9H3R2 512 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 REEP1Q9H902 201 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SMURF2Q9HAU4 748 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 S100A14Q9HCY8 104 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CCM2LQ9NUG4 571 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 PDP1Q9P0J1 537 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 MED31Q9Y3C7 131 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 LYVE1Q9Y5Y7 322 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 PHF3Q92576 2039 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 POLEQ07864 2286 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 TRAV36DV7A0A075B6V5 113 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SH3PXD2BA1X283 911 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 C7orf72A4D263 438 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 NKX2-6A6NCS4 301 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 EFCAB9A8MZ26 197 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 H0YHG0 523 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 H7C1C5 153 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 M0R129 80 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 FAAHO00519 579 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 IMPA2O14732 288 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CLOCKO15516 846 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 RRP9O43818 475 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 MITFO75030 526 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 OR7A10O76100 309 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 HPRP00739 348 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 LDLRP01130 860 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 PF4P02776 101 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 BGLAPP02818 100 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 HIST1H2ABP04908 130 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 GPIP06744 558 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 STSP08842 583 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 GSTP1P09211 210 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 TMIGD3P0DMS9 266 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 ZNF23P17027 643 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ITGA2P17301 1181 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CDH2P19022 906 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 BMP5P22003 454 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 POU1F1P28069 291 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 IFNA8P32881 189 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CA7P43166 264 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 HTR3AP46098 478 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SLC9A3P48764 834 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 RPS3AP61247 264 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 LCN6P62502 163 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ERVK-25P63136 954 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ELF3P78545 371 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 PMS2P3Q13401 168 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 C1DQ13901 141 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 RCN1Q15293 331 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ZNF239Q16600 458 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 ZSWIM7Q19AV6 140 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SPATS1Q496A3 300 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CLEC12AQ5QGZ9 265 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 LPCAT4Q643R3 524 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 B3GNT6Q6ZMB0 384 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 Q6ZPB1 254 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 TMPPEQ6ZT21 453 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ESPNLQ6ZVH7 1005 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 FCRLAQ7L513 359 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 HIST3H2AQ7L7L0 130 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SLC46A3Q7Z3Q1 461 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 LUZP2Q86TE4 346 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 STK32CQ86UX6 486 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 LIX1LQ8IVB5 337 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 MCEMP1Q8IX19 187 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 TUSC5Q8IXB3 177 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 LILRB2Q8N423 598 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 IQCF1Q8N6M8 205 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 CLDN22Q8N7P3 220 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 AQP11Q8NBQ7 271 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 OR10G2Q8NGC3 310 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 OR4C15Q8NGM1 316 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 HIST1H2ACQ93077 130 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 BPIFA2Q96DR5 249 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 TNFRSF13CQ96RJ3 184 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 NIPSNAP1Q9BPW8 284 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 TTYH2Q9BSA4 534 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ENKD1Q9H0I2 346 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 MMADHCQ9H3L0 296 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 RERGLQ9H628 205 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 MAGIXQ9H6Y5 334 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 EGLN3Q9H6Z9 239 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 NTN4Q9HB63 628 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 MED29Q9NX70 200 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 STOML1Q9UBI4 398 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 NKX1-2Q9UD57 310 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 Q9UFV3 132 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ERRFI1Q9UJM3 462 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 TMCC3Q9ULS5 477 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 ZNF835Q9Y2P0 537 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 MEMO1Q9Y316 297 aa4.82□□□□□ -1.64
PROM1-211ENST00000511153 SPIN1Q9Y657 262 aaPredicted RBP4.82□□□□□ -1.64
PROM1-211ENST00000511153 PRR14LQ5THK1 2151 aa4.81□□□□□ -1.64
PROM1-211ENST00000511153 UNC119BA6NIH7 251 aa4.81□□□□□ -1.64
PROM1-211ENST00000511153 GJE1A6NN92 205 aa4.81□□□□□ -1.64
PROM1-211ENST00000511153 EEF1E1-BLOC1S5C9J1V9 151 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms