RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 A0A0G2JPF8 293 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 HMGB1P1B2RPK0 211 aaPredicted RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 HNRNPCL2B2RXH8 293 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 HNRNPCL3B7ZW38 293 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 NR5A2O00482 541 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 ZNF208O43345 1280 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 FRS3O43559 492 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 DNPH1O43598 174 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 HNRNPCL1O60812 293 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 SMPD2O60906 423 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 HNRNPCL4P0DMR1 293 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 IGHV1-2P23083 117 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 FKBP2P26885 142 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 ADSLP30566 484 aaPredicted RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 CLK1P49759 484 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 H3F3AP84243 136 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 CAPRIN1Q14444 709 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 PDK3Q15120 406 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 STK11Q15831 433 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 PAGE3Q5JUK9 113 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 RNF220Q5VTB9 566 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 ZNF440Q8IYI8 595 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 ZNF100Q8IYN0 542 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 CADM2Q8N3J6 435 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 HIPK4Q8NE63 616 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 PIGXQ8TBF5 258 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 CKAP2Q8WWK9 683 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 IGFBPL1Q8WX77 278 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 DDIT4LQ96D03 193 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 SPDL1Q96EA4 605 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 THOC1Q96FV9 657 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 PERPQ96FX8 193 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 PIP5K1AQ99755 562 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 RSPO3Q9BXY4 272 aaPredicted RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 POTEKPQ9BYX7 375 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 A4GALTQ9NPC4 353 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 SLC52A3Q9NQ40 469 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 INTS9Q9NV88 658 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 EMC3Q9P0I2 261 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 TRAPPC4Q9Y296 219 aa7.58□□□□□ -1.2
PDPN-209ENST00000510906 NOSIPQ9Y314 301 aaKnown RBP7.58□□□□□ -1.2
PDPN-209ENST00000510906 TMEM247A6NEH6 219 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 HS3ST1O14792 307 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 CLOCKO15516 846 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 PGM3O95394 542 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 UQCRBP14927 111 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 H2AFXP16104 143 aaPredicted RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 COX5AP20674 150 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 CXCR1P25024 350 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 IDUAP35475 653 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 GNALP38405 381 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 ATP4BP51164 291 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 SLC16A1P53985 500 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 FOXG1P55316 489 aaPredicted RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 SLC35A1P78382 337 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 HOXC5Q00444 222 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 BNIP2Q12982 314 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 FADDQ13158 208 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 CEACAM7Q14002 265 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 LARS2Q15031 903 aaKnown RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 OR7A5Q15622 319 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 AGKQ53H12 422 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 ZNF311Q5JNZ3 666 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 Q5PR19 223 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 NCMAPQ5T1S8 102 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 LRIF1Q5T3J3 769 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 SHEQ5VZ18 495 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 WBP2NLQ6ICG8 309 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 SERPINA11Q86U17 422 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 P3H2Q8IVL5 708 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 LRRC75A-AS1Q8N1F1 130 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 UBE2J2Q8N2K1 259 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 ZNF433Q8N7K0 673 aaPredicted RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 TMEM99Q8N816 258 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 LILRB1Q8NHL6 650 aaPredicted RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 NFKBIDQ8NI38 313 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 HSD17B8Q92506 261 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 AKAP1Q92667 903 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDPN-209ENST00000510906 NEUROG1Q92886 237 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 APH1AQ96BI3 265 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 C3orf49Q96BT1 292 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 RAD21L1Q9H4I0 556 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 IKZF5Q9H5V7 419 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 VIPAS39Q9H9C1 493 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 BCL2L10Q9HD36 194 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 THUMPD1Q9NXG2 353 aaKnown RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 VAPAQ9P0L0 249 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 RNF115Q9Y4L5 304 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 FN1P02751 2386 aaKnown RBP7.57□□□□□ -1.2
PDPN-209ENST00000510906 FREM1Q5H8C1 2179 aa7.57□□□□□ -1.2
PDPN-209ENST00000510906 FLNAP21333 2647 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 TRBV5-3A0A0A0MS03 114 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 LIPT2A6NK58 231 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 OR5H1A6NKK0 313 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 C5orf58C9J3I9 102 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 GPR171O14626 319 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 ARHGEF9O43307 516 aa7.56□□□□□ -1.2
PDPN-209ENST00000510906 EIF1BO60739 113 aaKnown RBP7.56□□□□□ -1.2
PDPN-209ENST00000510906 MRPL33O75394 65 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms