RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 GJE1A6NN92 205 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CLCA1A8K7I4 914 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 KIR3DP1A8MWS1 328 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NPIPA7E9PJI5 369 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 AP3D1O14617 1153 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ARPC2O15144 300 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZIC3O60481 467 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CDC40O60508 579 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRAPPC6AO75865 159 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZFPL1O95159 310 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NUDT14O95848 222 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ANXA2P07355 339 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 HOXD4P09016 255 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 UBTFL6P0CB48 400 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NPIPA8P0DM63 369 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 THRBP10828 461 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PEPDP12955 493 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GP1BBP13224 206 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TCN1P20061 433 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 AQP1P29972 269 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PTGER4P35408 488 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 APOBEC1P41238 236 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLC1A3P43003 542 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CLK1P49759 484 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 UCP3P55916 312 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 RGS8P57771 180 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NCALDP61601 193 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF117Q03924 483 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 RBPJQ06330 500 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 DMTNQ08495 405 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PMS2P11Q13670 270 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GK3PQ14409 553 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 BCL2A1Q16548 175 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NRF1Q16656 503 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZSCAN26Q16670 478 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 DUSP7Q16829 419 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMEM44Q2T9K0 475 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PLPPR5Q32ZL2 321 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 LRRC23Q53EV4 343 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 IFI44LQ53G44 452 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CYBRD1Q53TN4 286 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CMPK2Q5EBM0 449 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM209BQ5JX69 171 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PDSS1Q5T2R2 415 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 WBP2NLQ6ICG8 309 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF613Q6PF04 617 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CBLN3Q6UW01 205 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ENPP6Q6UWR7 440 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TRILQ7L0X0 811 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GRINAQ7Z429 371 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 VRK2Q86Y07 508 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 LIX1LQ8IVB5 337 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SIAH3Q8IW03 269 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PM20D2Q8IYS1 436 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ULK2Q8IYT8 1036 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CLIP4Q8N3C7 705 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GTPBP8Q8N3Z3 284 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMCO5AQ8N6Q1 288 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 RNF148Q8N7C7 305 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GATSQ8NAP1 163 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ST6GALNAC3Q8NDV1 305 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM83FQ8NEG4 500 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 OR14L1PQ8NHC6 308 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF563Q8TA94 476 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NEIL3Q8TAT5 605 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 CNOT9Q92600 299 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SNRNP40Q96DI7 357 aaKnown RBP4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PYURFQ96I23 114 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 MPP4Q96JB8 637 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SNX22Q96L94 193 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 GPR137Q96N19 417 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 MOGAT1Q96PD6 335 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TAAR6Q96RI8 345 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ARHGDIGQ99819 225 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SLX1AQ9BQ83 275 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 ZNF559Q9BR84 538 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 UGT2B28Q9BY64 529 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 RTN4RQ9BZR6 473 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 YY1AP1Q9H869 796 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TMEM27Q9HBJ8 222 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SERINC1Q9NRX5 453 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 MED17Q9NVC6 651 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 TAS2R10Q9NYW0 307 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 SELENONQ9NZV5 590 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 MED11Q9P086 117 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 RPS6KB2Q9UBS0 482 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 FBXL2Q9UKC9 423 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 AP4B1Q9Y6B7 739 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 PCNX1Q96RV3 2341 aa4.94□□□□□ -1.62
HMGB1P44-201ENST00000508597 NCKAP5O14513 1909 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MYO7BQ6PIF6 2116 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 HIVEP3Q5T1R4 2406 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 MYO18BQ8IUG5 2567 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 UNC119BA6NIH7 251 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 FAM166BA8MTA8 275 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 NPIPA5E9PKD4 350 aa4.93□□□□□ -1.62
HMGB1P44-201ENST00000508597 G3V3Y1 287 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms