RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 IGF2P01344 180 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 IGHV3-9P01782 118 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 HRGP04196 525 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 THY1P04216 161 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 NCK1P16333 377 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 PTNP21246 168 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 IGHV1-2P23083 117 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 NR1H2P55055 460 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 TGFBR3Q03167 851 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 PUDPQ08623 228 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 PIN1Q13526 163 aaPredicted RBP14.74□□□□□ -0.05
SNCA-209ENST00000506244 FXNQ16595 210 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 BEX5Q5H9J7 111 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 GLYATQ6IB77 296 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 VTCN1Q7Z7D3 282 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 TSPYL5Q86VY4 417 aaPredicted RBP14.74□□□□□ -0.05
SNCA-209ENST00000506244 P2RY8Q86VZ1 359 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 LSRQ86X29 649 aaPredicted RBP14.74□□□□□ -0.05
SNCA-209ENST00000506244 UEVLDQ8IX04 471 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 OFCC1Q8IZS5 231 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 RNF148Q8N7C7 305 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 OR5J2Q8NH18 312 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 HSD17B8Q92506 261 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 CDRT15Q96T59 188 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 NANSQ9NR45 359 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 ZNF229Q9UJW7 825 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 SNX13Q9Y5W8 968 aa14.74□□□□□ -0.05
SNCA-209ENST00000506244 FBN2P35556 2912 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 FREM1Q5H8C1 2179 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 CIB4A0PJX0 185 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 HTR3EA5X5Y0 456 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 OR6A2O95222 327 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 TCN1P20061 433 aaPredicted RBP14.73□□□□□ -0.05
SNCA-209ENST00000506244 CBLP22681 906 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 EDNRAP25101 427 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 HOXC12P31275 282 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 DNAJA1P31689 397 aaKnown RBP14.73□□□□□ -0.05
SNCA-209ENST00000506244 FAPQ12884 760 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 ZNF74Q16587 644 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 C1QTNF12Q5T7M4 302 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 OR7E24Q6IFN5 339 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 NIPAL3Q6P499 406 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 CDH24Q86UP0 819 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 EPHX4Q8IUS5 362 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 ZIC4Q8N9L1 334 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 C1orf162Q8NEQ5 155 aaPredicted RBP14.73□□□□□ -0.05
SNCA-209ENST00000506244 TMEM239Q8WW34 195 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 MUCL1Q96DR8 90 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 MOGAT1Q96PD6 335 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 PRSS27Q9BQR3 290 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 FNDC11Q9BVV2 318 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 GORASP2Q9H8Y8 452 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 DCAF13Q9NV06 445 aaKnown RBP14.73□□□□□ -0.05
SNCA-209ENST00000506244 B3GAT1Q9P2W7 334 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 SEC14L4Q9UDX3 406 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 MED31Q9Y3C7 131 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 NOX1Q9Y5S8 564 aa14.73□□□□□ -0.05
SNCA-209ENST00000506244 DCHS2Q6V1P9 2916 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 ENO4A6NNW6 628 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 DEFB108AA8MXU0 73 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 B2RBV5 119 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 ZNF587BE7ETH6 402 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 SLC43A1O75387 559 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 CH25HO95992 272 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 MT-ND1P03886 318 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 HIST1H2ABP04908 130 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 UMPSP11172 480 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 MPGP29372 298 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 CLDN17P56750 224 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 KRTAP10-9P60411 292 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 STK11Q15831 433 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 TIMM23BQ5SRD1 257 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 TSPO2Q5TGU0 170 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 HIST3H2AQ7L7L0 130 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 TRPM8Q7Z2W7 1104 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 NANOGNBQ7Z5D8 188 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 CDC20BQ86Y33 519 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 WFDC8Q8IUA0 241 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 C17orf78Q8N4C9 275 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 ZNF433Q8N7K0 673 aaPredicted RBP14.72□□□□□ -0.05
SNCA-209ENST00000506244 RBM15BQ8NDT2 890 aaKnown RBP14.72□□□□□ -0.05
SNCA-209ENST00000506244 TMEM255BQ8WV15 326 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 HIST1H2ACQ93077 130 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 PIK3IP1Q96FE7 263 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 NSMCE2Q96MF7 247 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 AMBRA1Q9C0C7 1298 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 SLC7A10Q9NS82 523 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 CD300AQ9UGN4 299 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 A4GNTQ9UNA3 340 aa14.72□□□□□ -0.05
SNCA-209ENST00000506244 OR5H1A6NKK0 313 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 PLPP3O14495 311 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 ARPC2O15144 300 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 TRAF3IP2O43734 574 aaPredicted RBP14.71□□□□□ -0.05
SNCA-209ENST00000506244 RAD51DO75771 328 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 THBDP07204 575 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 ADORA3P0DMS8 318 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 NTF4P34130 210 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 SELENOPP49908 381 aa14.71□□□□□ -0.05
SNCA-209ENST00000506244 POU3F1Q03052 451 aaPredicted RBP14.71□□□□□ -0.05
SNCA-209ENST00000506244 TRAM2Q15035 370 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms