RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TFP02787 698 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 GYPBP06028 91 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 KLK3P07288 261 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 TACSTD2P09758 323 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 APOBEC1P41238 236 aaKnown RBP15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 LTBQ06643 244 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ZFP36L1Q07352 338 aaKnown RBP15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ZNF528Q3MIS6 628 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ARL9Q6T311 187 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 PXKQ7Z7A4 578 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 HEATR5AQ86XA9 2040 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 LAX1Q8IWV1 398 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 EXD3Q8N9H8 876 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 RASD2Q96D21 266 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 Q96M85 177 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 WDR77Q9BQA1 342 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 TTYH2Q9BSA4 534 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 RTN4RQ9BZR6 473 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ABCB9Q9NP78 766 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 TMEM14AQ9Y6G1 99 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 RP1P56715 2156 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ARL6IP5O75915 188 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 OR12D2P58182 307 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 CDK5R1Q15078 307 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 LINC01590Q5TEZ4 76 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 HBMQ6B0K9 141 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 SHISA6Q6ZSJ9 500 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 SYT14Q8NB59 555 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 PHOX2BQ99453 314 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 SRRQ9GZT4 340 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 RERGLQ9H628 205 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 ST6GALNAC2Q9UJ37 374 aa15.68■□□□□ 0.1
TRAPPC11-204ENST00000505676 LOC102723996A0A087X1L8 192 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 IGLV3-32A0A0A0MS00 114 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 TRAV1-2A0A0B4J238 106 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CD8B2A6NJW9 211 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ETV2O00321 342 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CLEC2LP0C7M8 214 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CD8BP10966 210 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 PYCR1P32322 319 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 RPS5P46782 204 aaKnown RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 SIRPAP78324 504 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 MC2RQ01718 297 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 GLYR1Q49A26 553 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 C1orf140Q5VVS0 124 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 OR6K6Q8NGW6 343 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ABHD4Q8TB40 342 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 PGLYRP3Q96LB9 341 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 INIPQ9NRY2 104 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 NCDNQ9UBB6 729 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 FER1L5A0AVI2 2057 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 FABP12A6NFH5 140 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 NPIPB13A6NJU9 1138 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 C9J4A7 227 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 NPIPB4C9JG80 1138 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 XKRYO14609 159 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ZNF208O43345 1280 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 DXOO77932 396 aaKnown RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 HNRNPCP07910 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CDKN2AP42771 156 aaKnown RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 RIN1Q13671 783 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 COL28A1Q2UY09 1125 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ADGRG3Q86Y34 549 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 RPS4Y2Q8TD47 263 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 DUSP19Q8WTR2 217 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ITPKCQ96DU7 683 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 DIRAS2Q96HU8 199 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CTRCQ99895 268 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 PTDSS2Q9BVG9 487 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 FSCN3Q9NQT6 498 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 MRPL39Q9NYK5 338 aaKnown RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 SIRT4Q9Y6E7 314 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 ASXL3Q9C0F0 2248 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 CABIN1Q9Y6J0 2220 aa15.67■□□□□ 0.1
TRAPPC11-204ENST00000505676 IGHV3-20A0A0C4DH32 117 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 SCN1BQ07699 218 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 FAM131AQ6UXB0 335 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 FAM220AQ7Z4H9 259 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 BMPERQ8N8U9 685 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 SCAIQ8N9R8 606 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 DTWD2Q8NBA8 298 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 PELI1Q96FA3 418 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 TSPAN32Q96QS1 320 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 SDHCQ99643 169 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 ATF6BQ99941 703 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 MIXL1Q9H2W2 232 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 RPRD1BQ9NQG5 326 aaKnown RBP15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 RHBDL2Q9NX52 303 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 AKAP7Q9P0M2 348 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 FKBP7Q9Y680 259 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 TMEM72A0PK05 275 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 ADAM10O14672 748 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 OR6A2O95222 327 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 PSMD7P51665 324 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 TOMM34Q15785 309 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 EXT1Q16394 746 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 EEF1A1P5Q5VTE0 462 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 FAM205BPQ63HN1 556 aa15.66■□□□□ 0.1
TRAPPC11-204ENST00000505676 DESI1Q6ICB0 168 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms