RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 PEX7O00628 323 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 XKRYO14609 159 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 SLC31A2O15432 143 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 RGS16O15492 202 aaPredicted RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 CLDN3O15551 220 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 BCAS1O75363 584 aaPredicted RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 OXSR1O95747 527 aaPredicted RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 AK1P00568 194 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ALDOBP05062 364 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF14P17017 642 aaPredicted RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PGAM1P18669 254 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 NPR2P20594 1047 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 IMPDH1P20839 514 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PCMT1P22061 227 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 CMA1P23946 247 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 GDI1P31150 447 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 GSSP48637 474 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ACADVLP49748 655 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 HMGCS1Q01581 520 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 SPIBQ01892 262 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ASPHQ12797 758 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PDIA2Q13087 525 aaKnown RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 GNMTQ14749 295 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 USH1GQ495M9 461 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ZBED5Q49AG3 693 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 COA6Q5JTJ3 125 aaKnown RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 NCR3LG1Q68D85 454 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 OR52E8Q6IFG1 317 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 CNSTQ6PJW8 725 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 HMGN2P46Q86SG4 172 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 THOC6Q86W42 341 aaKnown RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PGAM4Q8N0Y7 254 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 OR2L13Q8N349 312 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 FAM86B1Q8N7N1 296 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 OR10T2Q8NGX3 314 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 OR2G3Q8NGZ4 309 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 CCDC110Q8TBZ0 833 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 EFHD2Q96C19 240 aaPredicted RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 TM4SF19Q96DZ7 209 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 RMI2Q96E14 147 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 AMDHD1Q96NU7 426 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 GPA33Q99795 319 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ECSITQ9BQ95 431 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 RAB34Q9BZG1 259 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 SRMSQ9H3Y6 488 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 ELOVL3Q9HB03 270 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 TM9SF3Q9HD45 589 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 TMCO1Q9UM00 188 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 RASD1Q9Y272 281 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 MRPS33Q9Y291 106 aaKnown RBP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PCM1Q15154 2024 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 SF3B1O75533 1304 aaKnown RBP eCLIP1.33□□□□□ -2.2
SMAD1-203ENST00000502342 CARMIL3Q8ND23 1372 aa1.33□□□□□ -2.2
SMAD1-203ENST00000502342 PHF3Q92576 2039 aaKnown RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 TRAV40A0A0B4J280 105 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 LRP5LA4QPB2 252 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 COLCA2A8K830 154 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 A8MXQ7 604 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 C12orf77C9JDV5 145 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 LOC110117498-PIK3R3F6TDL0 507 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 H3BNH8 94 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 TAPBPO15533 448 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 DIRAS3O95661 229 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 AP2A1O95782 977 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 IGLV2-23P01705 113 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 CISD3P0C7P0 127 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 UBTFL1P0CB47 393 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 MUC1P15941 1255 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 HMGB2P26583 209 aaKnown RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 GYG1P46976 350 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 IL1RL1Q01638 556 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 OXA1LQ15070 435 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 STK11Q15831 433 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 GUCA2BQ16661 112 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 BEND3Q5T5X7 828 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 OR2G6Q5TZ20 316 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 FBXW9Q5XUX1 488 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 AFTPHQ6ULP2 937 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 PGAP1Q75T13 922 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 NLRP9Q7RTR0 991 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF546Q86UE3 836 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF573Q86YE8 665 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 GRAMD2AQ8IUY3 354 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 FADS6Q8N9I5 356 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ACOT4Q8N9L9 421 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 FNDC5Q8NAU1 212 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 CATSPER1Q8NEC5 780 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ACTRT1Q8TDG2 376 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ACOT11Q8WXI4 607 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 CTNNBL1Q8WYA6 563 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 FAM3CQ92520 227 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 SMARCD2Q92925 531 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ZNF641Q96N77 438 aaPredicted RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 OMDQ99983 421 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 RIOK2Q9BVS4 552 aaKnown RBP1.32□□□□□ -2.2
SMAD1-203ENST00000502342 DEFB127Q9H1M4 99 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 GBA3Q9H227 469 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 SLCO1B3Q9NPD5 702 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 ACTR3BQ9P1U1 418 aa1.32□□□□□ -2.2
SMAD1-203ENST00000502342 OPN4Q9UHM6 478 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms