RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 OIT3Q8WWZ8 545 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 BCL2L2Q92843 193 aaPredicted RBP4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 YIPF5Q969M3 257 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 TMEM186Q96B77 213 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 LRRC58Q96CX6 371 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 ZNF385AQ96PM9 386 aaKnown RBP4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 SDF2Q99470 211 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 OR11A1Q9GZK7 315 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 LAT2Q9GZY6 243 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 RABEP2Q9H5N1 569 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 REEP4Q9H6H4 257 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 CTPS2Q9NRF8 586 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 EMC3Q9P0I2 261 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 CHRNA9Q9UGM1 479 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 DCDC2Q9UHG0 476 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 OPN4Q9UHM6 478 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 ATP6V1HQ9UI12 483 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 SLC9A8Q9Y2E8 581 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 STK38LQ9Y2H1 464 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 HDGFL3Q9Y3E1 203 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 PCDHGB1Q9Y5G3 927 aa4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 EPPK1P58107 5090 aaKnown RBP4.8□□□□□ -1.64
CSNK1E-214ENST00000498529 SACSQ9NZJ4 4579 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 IGHV2OR16-5A0A0B4J2B6 119 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CIB4A0PJX0 185 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZC3H12DA2A288 527 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 LYNX1G3V0Z9 82 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SULT2B1O00204 365 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 FAAHO00519 579 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SCAMP2O15127 329 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 GSTA4O15217 222 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 FCMRO60667 390 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZNF432O94892 652 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 TFP02787 698 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 LYNX1P0DP58 116 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 GAAP10253 952 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CREB1P16220 341 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 EFNA1P20827 205 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 PCMT1P22061 227 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 RPS4Y1P22090 263 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ALDH3A1P30838 453 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 THBS4P35443 961 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SRP14P37108 136 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CSNK2A1P68400 391 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 TEKQ02763 1124 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 BTKQ06187 659 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 LSAMPQ13449 338 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CBFBQ13951 182 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CCNIQ14094 377 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 IQCCQ4KMZ1 466 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 RFTN2Q52LD8 501 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 XKR7Q5GH72 579 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CFAP157Q5JU67 520 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 C9orf135Q5VTT2 229 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 HIST2H2BDQ6DRA6 164 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 PAQR6Q6TCH4 344 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CASP12Q6UXS9 341 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZNF771Q7L3S4 317 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 LCA5Q86VQ0 697 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 GLCCI1Q86VQ1 547 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 NUDCD3Q8IVD9 361 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 RIMKLAQ8IXN7 391 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ATP6V1C2Q8NEY4 427 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 OR5D16Q8NGK9 328 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZFP28Q8NHY6 868 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 CDC26Q8NHZ8 85 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 MIPOL1Q8TD10 442 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SFXN5Q8TD22 340 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 MTERF3Q96E29 417 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZNF317Q96PQ6 595 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 OR7D2Q96RA2 312 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SLC6A7Q99884 636 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 THUMPD3Q9BV44 507 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 HOXD1Q9GZZ0 328 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 NOX3Q9HBY0 568 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 EXOSC3Q9NQT5 275 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 ZCCHC3Q9NUD5 404 aaKnown RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 HIF1ANQ9NWT6 349 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 SLC17A7Q9P2U7 560 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 FBXO9Q9UK97 447 aaPredicted RBP4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 USP22Q9UPT9 525 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 TRAPPC4Q9Y296 219 aa4.79□□□□□ -1.64
CSNK1E-214ENST00000498529 DNAH7Q8WXX0 4024 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 LOC105371242A0A075B767 164 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 TMEM82A0PJX8 343 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 TMEM72A0PK05 275 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 CCT8L1PA6NM43 557 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 FTCDNL1E5RQL4 147 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 RPL36A-HNRNPH2H7BZ11 118 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 TRIM77I1YAP6 450 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 hCG_2039718K7EN88 272 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 NDUFAB1O14561 156 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 ZNF208O43345 1280 aa4.78□□□□□ -1.64
CSNK1E-214ENST00000498529 NPHS1O60500 1241 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms