RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PEAR1Q5VY43 1037 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 NADSYN1Q6IA69 706 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 HACD2Q6Y1H2 254 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF783Q6ZMS7 281 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC36A1Q7Z2H8 476 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 RNF130Q86XS8 419 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 APOBEC3FQ8IUX4 373 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 CPOQ8IVL8 374 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 AFAP1L2Q8N4X5 818 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 STEAP2Q8NFT2 490 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR4D9Q8NGE8 314 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR5T3Q8NGG3 340 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC35G2Q8TBE7 412 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TBCKQ8TEA7 893 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC44A1Q8WWI5 657 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 RNASE6Q93091 150 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 PSMG2Q969U7 264 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 HEXIM2Q96MH2 286 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 GPR78Q96P69 363 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 DGAT2Q96PD7 388 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MRPL32Q9BYC8 188 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 SAV1Q9H4B6 383 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 RAVER2Q9HCJ3 691 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 MYOZ1Q9NP98 299 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 IL23AQ9NPF7 189 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ESM1Q9NQ30 184 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 RASSF1Q9NS23 344 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 PIH1D1Q9NWS0 290 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF586Q9NXT0 402 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SAE1Q9UBE0 346 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 TMCC3Q9ULS5 477 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 DUSP12Q9UNI6 340 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 WDR83OSQ9Y284 106 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ATXN2Q99700 1313 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 CENPEQ02224 2701 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 A0A087X0M5 115 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 A0A1B0GX30 115 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FAM47DPA6NHR8 397 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 YDJCA8MPS7 323 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 KBTBD13C9JR72 458 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 NPIPB11E5RHQ5 1161 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 STX16-NPEPL1H3BU86 382 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 PFASO15067 1338 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TP73O15350 636 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TNFSF12O43508 249 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 GADD45GO95257 159 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 GH2P01242 217 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TFP02787 698 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZGLP1P0C6A0 271 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SMIM17P0DL12 118 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 HPGDP15428 266 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CCNA2P20248 432 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OGNP20774 298 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 F2RP25116 425 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OTX1P32242 354 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 HSPA9P38646 679 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 PCP4P48539 62 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ARHGDIAP52565 204 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 EFNA5P52803 228 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ARF6P62330 175 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TIAL1Q01085 375 aaKnown RBP eCLIP1.27□□□□□ -2.21
XRN1-214ENST00000498077 HNRNPA0Q13151 305 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 NKPD1Q17RQ9 610 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 EOGTQ5NDL2 527 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 PAPPA-AS1Q5QFB9 102 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 KLHL24Q6TFL4 600 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SPINT4Q6UDR6 99 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 UNC5DQ6UXZ4 953 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ATP5L2Q7Z4Y8 100 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ADGRA3Q8IWK6 1321 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 HS3ST5Q8IZT8 346 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 LRRC75A-AS1Q8N1F1 130 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 LRRC47Q8N1G4 583 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 METTL13Q8N6R0 699 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 KDM1BQ8NB78 822 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 IL17REQ8NFR9 667 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR5A2Q8NGI9 324 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR13J1Q8NGT2 312 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC7A14Q8TBB6 771 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ETNPPLQ8TBG4 499 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CASTOR1Q8WTX7 329 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A43Q8WUT9 341 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 MITD1Q8WV92 249 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 GLMPQ8WWB7 406 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ITLN2Q8WWU7 325 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 KCTD13Q8WZ19 329 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FAM3CQ92520 227 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A46Q96AG3 418 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OLFM3Q96PB7 478 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FUNDC2Q9BWH2 189 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ABCG8Q9H221 673 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF286AQ9HBT8 521 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 PTPRHQ9HD43 1115 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MYOZ2Q9NPC6 264 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF331Q9NQX6 463 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 PARVAQ9NVD7 372 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MARCH4Q9P2E8 410 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 CD84Q9UIB8 345 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FBXL5Q9UKA1 691 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms