RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 C9orf16Q9BUW7 83 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 TBC1D23Q9NUY8 699 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 CLEC4AQ9UMR7 237 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 CFAP46Q8IYW2 2715 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 POLEQ07864 2286 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 PCNX1Q96RV3 2341 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 A0A1W2PNV4 684 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 KLF4O43474 513 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 RNF13O43567 381 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 MGRN1O60291 552 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 CYTIPO60759 359 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 FZD7O75084 574 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 ATP6V1G2O95670 118 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 TGM6O95932 706 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 GASTP01350 101 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 ANXA8P13928 327 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 AQP2P41181 271 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 CA7P43166 264 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 GSSP48637 474 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 PER3P56645 1201 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 RPS4XP62701 263 aaKnown RBP12.11□□□□□ -0.47
CPNE1-227ENST00000498056 SIRPAP78324 504 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 POU3F1Q03052 451 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-227ENST00000498056 TAF11Q15544 211 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 EEF1A1P5Q5VTE0 462 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 LPCAT4Q643R3 524 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 TMEM225Q6GV28 225 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 RTL6Q6ICC9 239 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 NCCRP1Q6ZVX7 275 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-227ENST00000498056 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-227ENST00000498056 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 UEVLDQ8IX04 471 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 CBR4Q8N4T8 237 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 DGCR6LQ9BY27 220 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 MCCC2Q9HCC0 563 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 KRT84Q9NSB2 600 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
CPNE1-227ENST00000498056 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 B3GALT5Q9Y2C3 310 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 HIF3AQ9Y2N7 669 aa12.11□□□□□ -0.47
CPNE1-227ENST00000498056 MBD3L4A6NDZ8 208 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 MBD3L3A6NE82 208 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 MBD3L5A6NJ08 208 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 CD8B2A6NJW9 211 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 PLPP3O14495 311 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 SOCS2O14508 198 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 HPRP00739 348 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 F13BP05160 661 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 GSTM3P21266 225 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 UQCRC1P31930 480 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 P2RY4P51582 365 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 AGFG1P52594 562 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 SLC34A1Q06495 639 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RASGEF1BQ0VAM2 473 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 TOP3AQ13472 1001 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 C1DQ13901 141 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 DAG1Q14118 895 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RNPS1Q15287 305 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 FAHD1Q6P587 224 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 KLHL17Q6TDP4 642 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 KDM8Q8N371 416 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 OR52L1Q8NGH7 329 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 MOSPD2Q8NHP6 518 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 MBD3L2Q8NHZ7 208 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 TEX47Q8TBZ9 253 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 LIPHQ8WWY8 451 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 WNT2BQ93097 391 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 TM9SF2Q99805 663 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 POLDIP3Q9BY77 421 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 OR52D1Q9H346 318 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 EGLN3Q9H6Z9 239 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
CPNE1-227ENST00000498056 EMC3Q9P0I2 261 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 IL20RAQ9UHF4 553 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 SIGLEC7Q9Y286 467 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 POFUT2Q9Y2G5 429 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 CDH10Q9Y6N8 788 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
CPNE1-227ENST00000498056 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 H3BN98 237 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 CCL21O00585 134 aa12.09□□□□□ -0.47
CPNE1-227ENST00000498056 NDUFB2O95178 105 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms