RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, human

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-208	ENST00000497287	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	OPN1LW	P04000	364 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	FREM3	P0C091	2139 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZNF3	P17036	446 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	POU3F2	P20265	443 aa	Predicted RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PAICS	P22234	425 aa	Known RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	AHCY	P23526	432 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	EEF1B2	P24534	225 aa	Known RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	FMO3	P31513	532 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	RFC3	P40938	356 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	MAGEA5	P43359	124 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	DIO1	P49895	249 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	GABARAPL2	P60520	117 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ERVK-25	P63136	954 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	EFNB1	P98172	346 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PUDP	Q08623	228 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZNF169	Q14929	603 aa	Predicted RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	OCLN	Q16625	522 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TBR1	Q16650	682 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	GXYLT1	Q4G148	440 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	EMC4	Q5J8M3	183 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TMEM201	Q5SNT2	666 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	SLC35F1	Q5T1Q4	408 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	GPR139	Q6DWJ6	353 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TMEM154	Q6P9G4	183 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ESPNL	Q6ZVH7	1005 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	JAZF1	Q86VZ6	243 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	LSR	Q86X29	649 aa	Predicted RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CCDC103	Q8IW40	242 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	LRRC75A	Q8NAA5	344 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ANKK1	Q8NFD2	765 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	APH1B	Q8WW43	257 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZHX1-C8orf76	Q96EF9	292 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	DNAJA3	Q96EY1	480 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	LRR1	Q96L50	414 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	KATNB1	Q9BVA0	655 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ENKD1	Q9H0I2	346 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	FN3K	Q9H479	309 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ACKR4	Q9NPB9	350 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	NRIP3	Q9NQ35	241 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TIGAR	Q9NQ88	270 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	INIP	Q9NRY2	104 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PLCXD1	Q9NUJ7	323 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TAS2R5	Q9NYW4	299 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	GRHPR	Q9UBQ7	328 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZMIZ1	Q9ULJ6	1067 aa		6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	RPL36	Q9Y3U8	105 aa	Known RBP	6.57	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CFAP47	Q6ZTR5	3102 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TPR	P12270	2363 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		A0A087WV48	116 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		A0A087WXM4	84 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		A0A0J9YW62	118 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		A0A1W2PNV4	684 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	IRGM	A1A4Y4	181 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	EFCAB10	A6NFE3	127 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	KDM4E	B2RXH2	506 aa	Predicted RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PRR23D1	E9PI22	279 aa	Predicted RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	C11orf98	E9PRG8	122 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	MS4A18	H0YCH9	400 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		M0R129	80 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	EIF1AY	O14602	144 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TNFSF11	O14788	317 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TFEC	O14948	347 aa	Predicted RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PRODH	O43272	600 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	MRPS14	O60783	128 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ENTPD6	O75354	484 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	AKR7A3	O95154	331 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	VAMP5	O95183	116 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	SLC2A10	O95528	541 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	TXNDC12	O95881	172 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ACTL6A	O96019	429 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	IGHM	P01871	453 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ITGB2	P05107	769 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	F13B	P05160	661 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PRR23D2	P0DMB1	279 aa	Predicted RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZNF24	P17028	368 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CRHBP	P24387	322 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ACVR2A	P27037	513 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	SHC1	P29353	583 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	SDHA	P31040	664 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	MLLT10	P55197	1068 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	GFRA1	P56159	465 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CARD18	P57730	90 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	RAC3	P60763	192 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	RPS3A	P61247	264 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	RPL27	P61353	136 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CXADR	P78310	365 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ITGAD	Q13349	1161 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	BCL2A1	Q16548	175 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	ZNF239	Q16600	458 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	SMN1	Q16637	294 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	MS4A18	Q3C1V0	323 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	HBM	Q6B0K9	141 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	LAIR2	Q6ISS4	152 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PAQR6	Q6TCH4	344 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287		Q6ZS92	163 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	CXXC5	Q7LFL8	322 aa	Known RBP	6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	PXK	Q7Z7A4	578 aa		6.56	□□□□□ -1.36
GPATCH4-208	ENST00000497287	IGFN1	Q86VF2	1251 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms