RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PYROXD1Q8WU10 500 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 FRAT1Q92837 279 aaPredicted RBP2.83□□□□□ -1.96
SMC4-225ENST00000497203 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMC4-225ENST00000497203 CMTM7Q96FZ5 175 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 TMEM101Q96IK0 257 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 NAT9Q9BTE0 207 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 ACTR6Q9GZN1 396 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 RANBP3Q9H6Z4 567 aaPredicted RBP2.83□□□□□ -1.96
SMC4-225ENST00000497203 IL26Q9NPH9 171 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 GLRX2Q9NS18 164 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 GIN1Q9NXP7 522 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 HOXC10Q9NYD6 342 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 ZNF256Q9Y2P7 627 aaPredicted RBP2.83□□□□□ -1.96
SMC4-225ENST00000497203 ATRXP46100 2492 aa2.83□□□□□ -1.96
SMC4-225ENST00000497203 NSG1A0A0A6YYJ2 146 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 FAM47DPA6NHR8 397 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 A8MUA0 341 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 AP3B1O00203 1094 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 WBP4O75554 376 aaKnown RBP2.82□□□□□ -1.96
SMC4-225ENST00000497203 SUPT7LO94864 414 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 MMP1P03956 469 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 HPNP05981 417 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 ZNF853P0CG23 659 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 CD1EP15812 388 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 CD1BP29016 333 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 YAP1P46937 504 aaKnown RBP2.82□□□□□ -1.96
SMC4-225ENST00000497203 SUCLG1P53597 346 aaKnown RBP2.82□□□□□ -1.96
SMC4-225ENST00000497203 WNT4P56705 351 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 TGFBR3Q03167 851 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 ZNF763Q0D2J5 394 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 ZNF77Q15935 545 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 UQCC3Q6UW78 93 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 RNF165Q6ZSG1 346 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 PAQR7Q86WK9 346 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 CDR2LQ86X02 465 aaPredicted RBP2.82□□□□□ -1.96
SMC4-225ENST00000497203 SLC22A9Q8IVM8 553 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 C6orf223Q8N319 242 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 TPRX1Q8N7U7 411 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 ACOT4Q8N9L9 421 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 DCUN1D4Q92564 292 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 ITCHQ96J02 903 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 PLEKHA8Q96JA3 519 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 TSG101Q99816 390 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 MFFQ9GZY8 342 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 PDFQ9HBH1 243 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 MRPL47Q9HD33 250 aaKnown RBP2.82□□□□□ -1.96
SMC4-225ENST00000497203 NMRK1Q9NWW6 199 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 SLC2A8Q9NY64 477 aa2.82□□□□□ -1.96
SMC4-225ENST00000497203 A0A1W2PPE3 182 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PSMB11A5LHX3 300 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FAM231BA6NCW3 169 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 OR7A10O76100 309 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 ERLIN2O94905 339 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FGF1P05230 155 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 ABOP16442 354 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FUT3P21217 361 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 HTR1EP28566 365 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 CASP14P31944 242 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FDFT1P37268 417 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 VHLP40337 213 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 VDAC2P45880 294 aaPredicted RBP2.81□□□□□ -1.96
SMC4-225ENST00000497203 TPMTP51580 245 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 NDPQ00604 133 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 BST2Q10589 180 aaKnown RBP2.81□□□□□ -1.96
SMC4-225ENST00000497203 HERPUD1Q15011 391 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PPP1R7Q15435 360 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 ZYG11AQ6WRX3 759 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FAM228AQ86W67 206 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PSTKQ8IV42 348 aaKnown RBP2.81□□□□□ -1.96
SMC4-225ENST00000497203 OR56B2PQ8NGI1 322 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 RASD2Q96D21 266 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 CNDP1Q96KN2 507 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PANX2Q96RD6 677 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 KCNA7Q96RP8 456 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PLEKHF1Q96S99 279 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 FMO2Q99518 471 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 NRIP2Q9BQI9 281 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 CCDC77Q9BR77 488 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 RIOK2Q9BVS4 552 aaKnown RBP2.81□□□□□ -1.96
SMC4-225ENST00000497203 ROGDIQ9GZN7 287 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 ASB8Q9H765 288 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 TM9SF3Q9HD45 589 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 PLSCR3Q9NRY6 295 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 KLHL28Q9NXS3 571 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 SPATA7Q9P0W8 599 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 NEUROG3Q9Y4Z2 214 aa2.81□□□□□ -1.96
SMC4-225ENST00000497203 GTF3C1Q12789 2109 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 TRIM49D1C9J1S8 452 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 E9PBE3 544 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 DYNC1I1O14576 645 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 TMEM50AO95807 157 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 C2P06681 752 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 UQCRFS1P1P0C7P4 283 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 TROVE2P10155 538 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMC4-225ENST00000497203 ZNF19P17023 458 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 TNNI1P19237 187 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 SLC2A5P22732 501 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 FMO3P31513 532 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 IFNA8P32881 189 aa2.8□□□□□ -1.96
SMC4-225ENST00000497203 GSSP48637 474 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms