RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IGHV3-9P01782 118 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 IGHV4-39P01824 125 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 HSD17B1P14061 328 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 CALB2P22676 271 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 TACR3P29371 465 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 KDELR2P33947 212 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 ACVR1BP36896 505 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 CDH11P55287 796 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 PDK3Q15120 406 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 P2RY8Q86VZ1 359 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-208ENST00000496375 C3orf49Q96BT1 292 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 MDFIQ99750 246 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 TRAF4Q9BUZ4 470 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-208ENST00000496375 REG4Q9BYZ8 158 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 PIF1Q9H611 641 aa12.67□□□□□ -0.38
CXCL12-208ENST00000496375 NOSIPQ9Y314 301 aaKnown RBP12.67□□□□□ -0.38
CXCL12-208ENST00000496375 CHD3Q12873 2000 aaKnown RBP12.67□□□□□ -0.38
CXCL12-208ENST00000496375 TMED7-TICAM2A0A0A6YYA0 188 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 CIB4A0PJX0 185 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 ZNF716A6NP11 495 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 FRS3O43559 492 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 TPST2O60704 377 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 NPIPB7O75200 414 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 NDUFS7O75251 213 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 RAD51DO75771 328 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 PMS2P2O95744 297 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 IFNA14P01570 189 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 CD8AP01732 235 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 OPN1SWP03999 348 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 CCNA2P20248 432 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 HTR2AP28223 471 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 RGS8P57771 180 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-208ENST00000496375 COPZ1P61923 177 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
CXCL12-208ENST00000496375 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 C16orf89Q6UX73 402 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 SSX8Q7RTT4 187 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 TRPM8Q7Z2W7 1104 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 SMYD1Q8NB12 490 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 PIGXQ8TBF5 258 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 APH1AQ96BI3 265 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 WFDC6Q9BQY6 131 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 OR11A1Q9GZK7 315 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 GMPR2Q9P2T1 348 aaKnown RBP12.66□□□□□ -0.38
CXCL12-208ENST00000496375 CD300AQ9UGN4 299 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
CXCL12-208ENST00000496375 BAG5Q9UL15 447 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 HDGFL3Q9Y3E1 203 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 CUBNO60494 3623 aa12.66□□□□□ -0.38
CXCL12-208ENST00000496375 ABCA1O95477 2261 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 GPR171O14626 319 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 PTNP21246 168 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 NTF4P34130 210 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 OR2B6P58173 313 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 NPTX1Q15818 432 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 DTX2Q86UW9 622 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 RANBP3LQ86VV4 465 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 CCDC103Q8IW40 242 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 ARHGAP24Q8N264 748 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 OR4D11Q8NGI4 311 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 DNAJA4Q8WW22 397 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 KCTD14Q9BQ13 255 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-208ENST00000496375 C1orf21Q9H246 121 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 TRAPPC4Q9Y296 219 aa12.65□□□□□ -0.38
CXCL12-208ENST00000496375 PLCE1Q9P212 2302 aa12.65□□□□□ -0.39
CXCL12-208ENST00000496375 A0A0B4J2E0 115 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 A0A1B0GWA3 101 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 A0A1B0GX12 115 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 A0A1W2PR80 420 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 CXCR6O00574 342 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 CRLF1O75462 422 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 TP53P04637 393 aaPredicted RBP12.64□□□□□ -0.39
CXCL12-208ENST00000496375 SLC16A1P53985 500 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 SELENOWP63302 87 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 SLC25A3Q00325 362 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 HOXC5Q00444 222 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 CYBRD1Q53TN4 286 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 SAMD4BQ5PRF9 694 aaKnown RBP12.64□□□□□ -0.39
CXCL12-208ENST00000496375 ZNF613Q6PF04 617 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 C5orf46Q6UWT4 87 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 TMEM108Q6UXF1 575 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
CXCL12-208ENST00000496375 OR52E4Q8NGH9 312 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 OR6T1Q8NGN1 323 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 STK35Q8TDR2 534 aa12.64□□□□□ -0.39
CXCL12-208ENST00000496375 SLC26A7Q8TE54 656 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms