RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 WDR31Q8NA23 367 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 KBTBD8Q8NFY9 601 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 MOGAT1Q96PD6 335 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 PIP5K1AQ99755 562 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 ELAC2Q9BQ52 826 aaKnown RBP12.72□□□□□ -0.37
PDAP1-204ENST00000496335 C1QTNF6Q9BXI9 259 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 AMBRA1Q9C0C7 1298 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 GMPR2Q9P2T1 348 aaKnown RBP12.72□□□□□ -0.37
PDAP1-204ENST00000496335 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 SLC25A15Q9Y619 301 aa12.72□□□□□ -0.37
PDAP1-204ENST00000496335 MS4A18H0YCH9 400 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 AIM2O14862 343 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 UPK3AO75631 287 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 KRT33AO76009 404 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 LYPD3O95274 346 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 COX4I1P13073 169 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF43P17038 809 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 TNFRSF1BP20333 461 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 MPGP29372 298 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF83P51522 516 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 CLDN17P56750 224 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 IL1RL1Q01638 556 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 MS4A18Q3C1V0 323 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 SWT1Q5T5J6 900 aaKnown RBP12.71□□□□□ -0.37
PDAP1-204ENST00000496335 OR7E24Q6IFN5 339 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF613Q6PF04 617 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 LINC00114Q6XXX2 140 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 WDR88Q6ZMY6 472 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 H1FNTQ75WM6 255 aaPredicted RBP12.71□□□□□ -0.37
PDAP1-204ENST00000496335 LINGO2Q7L985 606 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 TREML1Q86YW5 311 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 C10orf53Q8N6V4 93 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 POMGNT2Q8NAT1 580 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 RP9Q8TA86 221 aaKnown RBP12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ADAMTS16Q8TE57 1224 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 IGFBPL1Q8WX77 278 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 PERPQ96FX8 193 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 OXGR1Q96P68 337 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 EPYCQ99645 322 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 SLC17A5Q9NRA2 495 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 CMTM6Q9NX76 183 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 B3GALT5Q9Y2C3 310 aa12.71□□□□□ -0.37
PDAP1-204ENST00000496335 ABCD4O14678 606 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 CHP2O43745 196 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 CCDC22O60826 627 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 HPRP00739 348 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 HLA-DOBP13765 273 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 NQO1P15559 274 aaKnown RBP12.7□□□□□ -0.38
PDAP1-204ENST00000496335 SLC25A3Q00325 362 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 C1DQ13901 141 aaKnown RBP12.7□□□□□ -0.38
PDAP1-204ENST00000496335 VEZF1Q14119 521 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 ZNF672Q499Z4 452 aaPredicted RBP12.7□□□□□ -0.38
PDAP1-204ENST00000496335 Q5PR19 223 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 ERICH5Q6P6B1 374 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 SPATA21Q7Z572 469 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 CARM1Q86X55 608 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 RASSF5Q8WWW0 418 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 PROX1Q92786 737 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 SLC41A3Q96GZ6 507 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 ALKBH3Q96Q83 286 aaPredicted RBP12.7□□□□□ -0.38
PDAP1-204ENST00000496335 TMEM43Q9BTV4 400 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 FAM107BQ9H098 131 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 SLC7A7Q9UM01 511 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
PDAP1-204ENST00000496335 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 TRAPPC13A5PLN9 417 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 FAM220BPB1ANY3 271 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 SHISA9B4DS77 424 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 ZNF587BE7ETH6 402 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 M0R1B8 84 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-204ENST00000496335 ZNF432O94892 652 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 GYS2P54840 703 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 PMS2P3Q13401 168 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 MFSD13AQ14CX5 517 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 HIKESHIQ53FT3 197 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 SSX8Q7RTT4 187 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 MICU2Q8IYU8 434 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 LRRC75A-AS1Q8N1F1 130 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-204ENST00000496335 C1orf162Q8NEQ5 155 aaPredicted RBP12.69□□□□□ -0.38
PDAP1-204ENST00000496335 OR2T12Q8NG77 320 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 OR6S1Q8NH40 331 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 TMEM171Q8WVE6 324 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 FBXW5Q969U6 566 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 ASPNQ9BXN1 380 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 PCDHAC1Q9H158 963 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 CORINQ9Y5Q5 1042 aa12.69□□□□□ -0.38
PDAP1-204ENST00000496335 KPNA4O00629 521 aaPredicted RBP12.68□□□□□ -0.38
PDAP1-204ENST00000496335 ARHGEF9O43307 516 aa12.68□□□□□ -0.38
PDAP1-204ENST00000496335 TRAF3IP2O43734 574 aaPredicted RBP12.68□□□□□ -0.38
PDAP1-204ENST00000496335 CH25HO95992 272 aa12.68□□□□□ -0.38
PDAP1-204ENST00000496335 SOD3P08294 240 aa12.68□□□□□ -0.38
PDAP1-204ENST00000496335 DANCRP0C864 163 aa12.68□□□□□ -0.38
PDAP1-204ENST00000496335 CD40P25942 277 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms