RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SLC29A4Q7RTT9 530 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SLC16A9Q7RTY1 509 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 KCTD20Q7Z5Y7 419 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 SLC35F3Q8IY50 421 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 PRR22Q8IZ63 422 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 LRRC75AQ8NAA5 344 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 C1orf216Q8TAB5 229 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 CREB3L1Q96BA8 519 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 OR14A2Q96R54 314 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 PDCD1LG2Q9BQ51 273 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 FOXQ1Q9C009 403 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ADAM19Q9H013 955 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 ZCCHC4Q9H5U6 513 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 FKRPQ9H9S5 495 aa10.09□□□□□ -0.79
CMSS1-208ENST00000496116 COL5A1P20908 1838 aaPredicted RBP10.09□□□□□ -0.79
CMSS1-208ENST00000496116 NUP210LQ5VU65 1888 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 A0A0B4J293 547 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 A0A1B0GVT2 93 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 A0A1B0GX78 115 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 A0A1W2PPK0 400 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 ANKRD61A6NGH8 418 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 A8MV72 311 aaPredicted RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 PDCD5O14737 125 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 TO15178 435 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 NDUFB5O43674 189 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 CDC40O60508 579 aaKnown RBP eCLIP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 EIF4E2O60573 245 aaKnown RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 F13BP05160 661 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 CXCR1P25024 350 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 MST1P26927 711 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 ITPKBP27987 946 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 UQCRC1P31930 480 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 PSMB10P40306 273 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 AFF3P51826 1226 aaKnown RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 NR0B1P51843 470 aaKnown RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 RPS11P62280 158 aaKnown RBP eCLIP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF117Q03924 483 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 RPL18Q07020 188 aaKnown RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 MRPL28Q13084 256 aaKnown RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 YIF1BQ5BJH7 314 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 GPR139Q6DWJ6 353 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 BAIAP2L2Q6UXY1 529 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 KMT5CQ86Y97 462 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 OR2T4Q8NH00 348 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 KTI12Q96EK9 354 aaPredicted RBP10.08□□□□□ -0.8
CMSS1-208ENST00000496116 RNF31Q96EP0 1072 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 DMRTB1Q96MA1 342 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 CMTM3Q96MX0 182 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 LPAR4Q99677 370 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 DPYSL5Q9BPU6 564 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 TBL1XR1Q9BZK7 514 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF281Q9Y2X9 895 aa10.08□□□□□ -0.8
CMSS1-208ENST00000496116 FAM172BPA6NC97 362 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 OR6C76A6NM76 312 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 FAM171A2A8MVW0 826 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ALG1L2C9J202 215 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM127O75204 238 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SLC25A12O75746 678 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 UBL3O95164 117 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 NUDT14O95848 222 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RENP00797 406 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SRMP19623 302 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 PGCP20142 388 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 AHCYP23526 432 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SLC6A1P30531 599 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 STARD6P59095 220 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 VWA2Q5GFL6 755 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TMEM53Q6P2H8 277 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 UNQ9370/PRO34162Q6UXP9 181 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ASB18Q6ZVZ8 466 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 C9orf40Q8IXQ3 194 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 OR1N1Q8NGS0 311 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 UPRTQ96BW1 309 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SLC41A2Q96JW4 573 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 WWTR1Q9GZV5 400 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TP63Q9H3D4 680 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RANGRFQ9HD47 186 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SEMA5BQ9P283 1151 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RABL2AQ9UBK7 228 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 SPATA2Q9UM82 520 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RABL2BQ9UNT1 228 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 ALG5Q9Y673 324 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 CDC14CA4D256 554 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 INMT-MINDY4F8WBC2 141 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 RGS13O14921 159 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 BCAT2O15382 392 aaPredicted RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 EEF1E1O43324 174 aaKnown RBP10.07□□□□□ -0.8
CMSS1-208ENST00000496116 TSPAN2O60636 221 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 YES1P07947 543 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 GSTT2P0CG29 244 aa10.07□□□□□ -0.8
CMSS1-208ENST00000496116 GSTT2BP0CG30 244 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms