RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.33□□□□□ -1.24
GARNL3-219ENST00000495172 VPREB3Q9UKI3 123 aa7.33□□□□□ -1.24
GARNL3-219ENST00000495172 LSM4Q9Y4Z0 139 aaKnown RBP7.33□□□□□ -1.24
GARNL3-219ENST00000495172 ZC3H12DA2A288 527 aaKnown RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 MEGF11A6BM72 1044 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 ZSCAN5BA6NJL1 495 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 CEACAM18A8MTB9 384 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 ETV2O00321 342 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 AKR7A3O95154 331 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 PDYNP01213 254 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 PROCP04070 461 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 WNT2P09544 360 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 SLC6A2P23975 617 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 IVDP26440 423 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 AQP5P55064 265 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 KLF3P57682 345 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 GTF2H2Q13888 395 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 KLHL26Q53HC5 615 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 CDKL4Q5MAI5 379 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 RNASEH2BQ5TBB1 312 aaKnown RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 TTC19Q6DKK2 380 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 RGS7BPQ6MZT1 257 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 GTF2H2CQ6P1K8 395 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 NIPAL3Q6P499 406 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 FRRS1Q6ZNA5 592 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 GALNT7Q86SF2 657 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 NDUFA11Q86Y39 141 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 LDLRAD3Q86YD5 345 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 LINC00528Q8N1L1 170 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 FITM2Q8N6M3 262 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 SNX33Q8WV41 574 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 LHX4Q969G2 390 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 TMEM45BQ96B21 275 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 IQCDQ96DY2 449 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 FRG2BQ96QU4 278 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 OR5M11Q96RB7 305 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 ATOH8Q96SQ7 321 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 BPIFA3Q9BQP9 254 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 SSBP3Q9BWW4 388 aaPredicted RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 SHCBP1LQ9BZQ2 653 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 LAT2Q9GZY6 243 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 C3orf14Q9HBI5 128 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 GIMAP4Q9NUV9 329 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 NKIRAS2Q9NYR9 191 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 AHSPQ9NZD4 102 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 NUDT4Q9NZJ9 180 aa7.32□□□□□ -1.24
GARNL3-219ENST00000495172 REXO2Q9Y3B8 237 aaKnown RBP7.32□□□□□ -1.24
GARNL3-219ENST00000495172 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 KIR2DS1A0A191URI9 304 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 A0A1W2PRD5 423 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 A0A1W2PRF3 423 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 A0A1W2PRM7 423 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 C22orf46C9J442 243 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 POC1B-GALNT4F8VUJ3 575 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 TM9SF1O15321 606 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 BMP2P12643 396 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 TGFBR2P37173 567 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 GATA4P43694 442 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 PTDSS1P48651 473 aaKnown RBP7.31□□□□□ -1.24
GARNL3-219ENST00000495172 ZNF81P51508 661 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SUMO3P55854 103 aaPredicted RBP7.31□□□□□ -1.24
GARNL3-219ENST00000495172 DLX1P56177 255 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SLC35A2P78381 396 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 GALK2Q01415 458 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 HSPB3Q12988 150 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 PFKFB4Q16877 469 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 RUNDC3AQ59EK9 446 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SPANXN3Q5MJ09 141 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 PHYHD1Q5SRE7 291 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 C1QTNF12Q5T7M4 302 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SEL1L2Q5TEA6 688 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 STEAP4Q687X5 459 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 LRRC28Q86X40 367 aaPredicted RBP7.31□□□□□ -1.24
GARNL3-219ENST00000495172 GALNT4Q8N4A0 578 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 COX18Q8N8Q8 333 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 FGFBP3Q8TAT2 258 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SYNPRQ8TBG9 265 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 C16orf78Q8WTQ4 265 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 CDS1Q92903 461 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 GIMAP5Q96F15 307 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 HES6Q96HZ4 224 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 AMDHD1Q96NU7 426 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 CCDC106Q9BWC9 280 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 NOL11Q9H8H0 719 aaKnown RBP7.31□□□□□ -1.24
GARNL3-219ENST00000495172 SERINC1Q9NRX5 453 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 LMBRD1Q9NUN5 540 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 ZNF224Q9NZL3 707 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 IL20RAQ9UHF4 553 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 ACOT9Q9Y305 439 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 KCNE3Q9Y6H6 103 aa7.31□□□□□ -1.24
GARNL3-219ENST00000495172 DSPPQ9NZW4 1301 aa7.3□□□□□ -1.24
GARNL3-219ENST00000495172 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
GARNL3-219ENST00000495172 IGLV3-9A0A075B6K5 115 aa7.3□□□□□ -1.24
GARNL3-219ENST00000495172 IGHV1-69DA0A0B4J2H0 117 aa7.3□□□□□ -1.24
GARNL3-219ENST00000495172 PPP6CO00743 305 aa7.3□□□□□ -1.24
GARNL3-219ENST00000495172 PCDH7O60245 1069 aa7.3□□□□□ -1.24
GARNL3-219ENST00000495172 ZFPL1O95159 310 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms