RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 UPP1Q16831 310 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 KRTAP27-1Q3LI81 207 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 HBMQ6B0K9 141 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM71E1Q6IPT2 247 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 Q6ZS49 121 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LRRC70Q7Z2Q7 622 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PIM3Q86V86 326 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 KRT73Q86Y46 540 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 HJURPQ8NCD3 748 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR6M1Q8NGM8 313 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MCFD2Q8NI22 146 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 GLYATL2Q8WU03 294 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 RGP1Q92546 391 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ELMO1Q92556 727 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 RNF125Q96EQ8 232 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PPP3R2Q96LZ3 170 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PKP4Q99569 1192 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CDCA3Q99618 268 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PRSS27Q9BQR3 290 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 C2orf88Q9BSF0 95 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CCM2Q9BSQ5 444 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MSTO1Q9BUK6 570 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MND1Q9BWT6 205 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ADGRE3Q9BY15 652 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SLC39A8Q9C0K1 460 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 DPEP2Q9H4A9 486 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FN3KRPQ9HA64 309 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SPHK2Q9NRA0 654 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 POLE3Q9NRF9 147 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 INPP5EQ9NRR6 644 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ABCB8Q9NUT2 735 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MSRB1Q9NZV6 116 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CAMK2AQ9UQM7 478 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LRP12Q9Y561 859 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FLVCR1Q9Y5Y0 555 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 KCNE2Q9Y6J6 123 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 TANC2Q9HCD6 1990 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 F8W036 122 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 NPIPB9F8W1W9 429 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MANBAO00462 879 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PGRMC2O15173 223 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 VEGFDO43915 354 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LRP3O75074 770 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR5F1O95221 314 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SLC16A8O95907 504 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LINC00271P0C7V0 271 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 STAG3L1P0CL83 205 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CXCL8P10145 99 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SAGP10523 405 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 GJA1P17302 382 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 TACR3P29371 465 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 KDELR2P33947 212 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MMP12P39900 470 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CD79BP40259 229 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SLC9A3P48764 834 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ERFP50548 548 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SUCLG1P53597 346 aaKnown RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 H2BFSP57053 126 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 GAGE1Q13065 139 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MAD2L1Q13257 205 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PCK2Q16822 640 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CYP51A1Q16850 503 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PRICKLE4Q2TBC4 344 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZFP69Q49AA0 526 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 XKR9Q5GH70 373 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LIPNQ5VXI9 398 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 TMEM268Q5VZI3 342 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 COLCA1Q6ZS62 124 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM92BQ6ZTR7 304 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 IKBIPQ70UQ0 350 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 RPS27LQ71UM5 84 aaKnown RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LRRC28Q86X40 367 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MISPQ8IVT2 679 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 SCN4BQ8IWT1 228 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ITFG1Q8TB96 612 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LKAAEAR1Q8TD35 194 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ASB5Q8WWX0 329 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OVCA2Q8WZ82 227 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 AKAP1Q92667 903 aaKnown RBP eCLIP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 NEURL3Q96EH8 262 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 CXorf58Q96LI9 332 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 LINC00615Q96LM1 132 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 PACRGQ96M98 296 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 TXN2Q99757 166 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 UQCC2Q9BRT2 126 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 UCK2Q9BZX2 261 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZNF436Q9C0F3 470 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 NUAK2Q9H093 628 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 WDR13Q9H1Z4 485 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR51M1Q9H341 326 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 EVA1AQ9H8M9 152 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MRPS30Q9NP92 439 aaKnown RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 MYNNQ9NPC7 610 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 GSN-AS1Q9NRJ2 163 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM49BQ9NUQ9 324 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 ERAP1Q9NZ08 941 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 OPN4Q9UHM6 478 aa2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAF1Q9UNN5 650 aaPredicted RBP2.28□□□□□ -2.04
CDC42EP3-205ENST00000494083 DLGAP4Q9Y2H0 992 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms