RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 DCTN3O75935 186 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 OR6A2O95222 327 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 BGLAPP02818 100 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 CD3EP07766 207 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 THRBP10828 461 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 NQO1P15559 274 aaKnown RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 COX5AP20674 150 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 EDNRAP25101 427 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 MPGP29372 298 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 HOXC12P31275 282 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 OR1E2P47887 323 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 CRYBA2P53672 197 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 CLDN17P56750 224 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 PSME3P61289 254 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 NPTX1Q15818 432 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 GABRA6Q16445 453 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ACKR1Q16570 336 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 NCMAPQ5T1S8 102 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 TSPO2Q5TGU0 170 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 C8orf82Q6P1X6 216 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 NIPAL3Q6P499 406 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 KLHL17Q6TDP4 642 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 PAMR1Q6UXH9 720 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 DEF8Q6ZN54 512 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 FKBP9P1Q75LS8 142 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 LSRQ86X29 649 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 EPHX4Q8IUS5 362 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 UEVLDQ8IX04 471 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 KDM8Q8N371 416 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 SCAIQ8N9R8 606 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ADPRHL1Q8NDY3 354 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 C1orf162Q8NEQ5 155 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 OR4D11Q8NGI4 311 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ZNF417Q8TAU3 575 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 PIGTQ969N2 578 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 HS6ST2Q96MM7 605 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ZNF587Q96SQ5 575 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 FOXC2Q99958 501 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 KCTD14Q9BQ13 255 aaPredicted RBP6.15□□□□□ -1.42
TOP3A-207ENST00000493648 SLC19A3Q9BZV2 496 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 PCDHAC1Q9H158 963 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ALG2Q9H553 416 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 UBTD1Q9HAC8 227 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 SPAG4Q9NPE6 437 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 SLC7A10Q9NS82 523 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 ADA2Q9NZK5 511 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 RIMS3Q9UJD0 308 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 RCE1Q9Y256 329 aa6.15□□□□□ -1.42
TOP3A-207ENST00000493648 FBN2P35556 2912 aa6.15□□□□□ -1.43
TOP3A-207ENST00000493648 ABCA4P78363 2273 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 A0A1W2PPR1 153 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 HTR3EA5X5Y0 456 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 DPRXA6NFQ7 191 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF726A6NNF4 738 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF587BE7ETH6 402 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 MS4A18H0YCH9 400 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PLPP3O14495 311 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 CLOCKO15516 846 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 SHOX2O60902 331 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 FZD7O75084 574 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 SLC43A1O75387 559 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 OR5F1O95221 314 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ATE1O95260 518 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 LYPD3O95274 346 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF682O95780 498 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 CH25HO95992 272 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 WNT11O96014 354 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 THY1P04216 161 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ITGA5P08648 1049 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ADORA3P0DMS8 318 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 UMPSP11172 480 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 CDH2P19022 906 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 CD53P19397 219 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 TNFRSF1BP20333 461 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 AHCYP23526 432 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PAX7P23759 505 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 LOXP28300 417 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 RBM34P42696 430 aaKnown RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 GSK3BP49841 420 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 SELENOPP49908 381 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 MNAT1P51948 309 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 FOXG1P55316 489 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PRPS1P60891 318 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 LTBQ06643 244 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PUDPQ08623 228 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ST3GAL3Q11203 375 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PIN1Q13526 163 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 TESK1Q15569 626 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 DEFB113Q30KQ7 82 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 MS4A18Q3C1V0 323 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 GKAP1Q5VSY0 366 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 C9orf135Q5VTT2 229 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 HMBOX1Q6NT76 420 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 TMEM108Q6UXF1 575 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 SPNS3Q6ZMD2 512 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF704Q6ZNC4 412 aaPredicted RBP6.14□□□□□ -1.43
TOP3A-207ENST00000493648 C20orf204Q6ZNR8 217 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 PXKQ7Z7A4 578 aa6.14□□□□□ -1.43
TOP3A-207ENST00000493648 LURAP1LQ8IV03 231 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms