RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR2AT4A6NND4 320 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 NDUFS4O43181 175 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 DLSTP36957 453 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 AKR1C3P42330 323 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 SOX2P48431 317 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 POLR2LP62875 67 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ACTC1P68032 377 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ACTA1P68133 377 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 RAB33AQ14088 237 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 PEA15Q15121 130 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 FAM110CQ1W6H9 321 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C11orf87Q6NUJ2 197 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 RPL22L1Q6P5R6 122 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR4A4PQ8NGN8 299 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR2AG1Q9H205 316 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 SIGLEC7Q9Y286 467 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 GATCO43716 136 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 RAD1O60671 282 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR2F2O95006 317 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 LIPCP11150 499 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF44P15621 663 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ABOP16442 354 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 GRPRP30550 384 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ATP1B3P54709 279 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 OR2F1Q13607 317 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF234Q14588 700 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 FNDC3BQ53EP0 1204 aaKnown RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 MORN1Q5T089 497 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF793Q6ZN11 406 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C12orf40Q86WS4 652 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 MISPQ8IVT2 679 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 NUP43Q8NFH3 380 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 TMEM239Q8WW34 195 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 WDR77Q9BQA1 342 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 FAM83CQ9BQN1 747 aa10.73□□□□□ -0.69
HDAC4-210ENST00000493582 C6orf106Q9H6K1 298 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF223Q9UK11 482 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 RPH3AQ9Y2J0 694 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-210ENST00000493582 ZFPL1O95159 310 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 RCBTB2O95199 551 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 PAPLNO95428 1278 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF3P17036 446 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ADRA2CP18825 462 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 PRKAR1BP31321 381 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 SREBF2Q12772 1141 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 AMZ1Q400G9 498 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR4C11Q6IEV9 310 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 LIN54Q6MZP7 749 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 STAC2Q6ZMT1 411 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 TMPRSS12Q86WS5 348 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 DND1Q8IYX4 353 aaKnown RBP10.72□□□□□ -0.69
HDAC4-210ENST00000493582 SLC16A11Q8NCK7 471 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR4K13Q8NH42 304 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 PPP1R1CQ8WVI7 109 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ZNRF4Q8WWF5 429 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 RGP1Q92546 391 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-210ENST00000493582 BPIFA2Q96DR5 249 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 PHYHIPLQ96FC7 376 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 AIF1LQ9BQI0 150 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 RHBGQ9H310 441 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 KRCC1Q9NPI7 259 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-210ENST00000493582 UQCC1Q9NVA1 299 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 DENND4CQ5VZ89 1909 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ANAPC1Q9H1A4 1944 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 MYOFQ9NZM1 2061 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 TMEM82A0PJX8 343 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ABCD3P28288 659 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 CENPAP49450 140 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF136P52737 540 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 EFNB2P52799 333 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 HTRA4P83105 476 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-210ENST00000493582 C9orf152Q5JTZ5 239 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 TMEM150AQ86TG1 271 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR52E2Q8NGJ4 325 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR1J4Q8NGS1 313 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR9A2Q8NGT5 310 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 OR10R2Q8NGX6 335 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 SLC35A4Q96G79 324 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 TNFRSF13CQ96RJ3 184 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 KLHL31Q9H511 634 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 COMMD9Q9P000 198 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 Q9Y3F1 56 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 ATG4BQ9Y4P1 393 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 COL4A3Q01955 1670 aa10.72□□□□□ -0.69
HDAC4-210ENST00000493582 CPED1A4D0V7 1026 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 UBE2CO00762 179 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 IMPA2O14732 288 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 MAS1P04201 325 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 SPI1P17947 270 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 CAPZA1P52907 286 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 LTBQ06643 244 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF813Q6ZN06 617 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 Q6ZNB5 142 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms