RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 TSPAN2O60636 221 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 UGDHO60701 494 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 TNFRSF21O75509 655 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 SEMA3DO95025 777 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 IFNA2P01563 188 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 PSKH1P11801 424 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 PEPDP12955 493 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 IL7RP16871 459 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 EFNA1P20827 205 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-213ENST00000492506 DPP4P27487 766 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 GSK3BP49841 420 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 ISL1P61371 349 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 VBP1P61758 197 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 SLC35A2P78381 396 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 TEKQ02763 1124 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 ASAH1Q13510 395 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 TRMT12Q53H54 448 aaKnown RBP11.74□□□□□ -0.53
HDAC3-213ENST00000492506 CLVS2Q5SYC1 327 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 ZBTB37Q5TC79 503 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 SLC48A1Q6P1K1 146 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 DNM1P46Q6ZS02 220 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 SPATA19Q7Z5L4 167 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 CMC1Q7Z7K0 106 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 MICU2Q8IYU8 434 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 PLD6Q8N2A8 252 aaKnown RBP11.74□□□□□ -0.53
HDAC3-213ENST00000492506 CELF2-AS1Q8N7Q2 184 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 OR52R1Q8NGF1 315 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 REPS1Q96D71 796 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 CCDC115Q96NT0 180 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 MAGIXQ9H6Y5 334 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 DKKL1Q9UK85 242 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
HDAC3-213ENST00000492506 A0A0G2JMP0 313 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 LOC100130705A0A1B0GUX0 176 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 TOR1AO14656 332 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PHF1O43189 567 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 KLK1P06870 262 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 THBS1P07996 1170 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 RBP1P09455 135 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CT45A8P0DMV1 189 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CT45A9P0DMV2 189 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CD36P16671 472 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ATF4P18848 351 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 SLC6A2P23975 617 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 FEN1P39748 380 aaKnown RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PIK3CGP48736 1102 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 SCN1BQ07699 218 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CDK5R2Q13319 367 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 VEZF1Q14119 521 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 LTB4RQ15722 352 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 TBCEQ15813 527 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 IMPG1Q17R60 797 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CT45A2Q5DJT8 189 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 C10orf62Q5T681 223 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 FAM214BQ7L5A3 538 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CHMP1BQ7LBR1 199 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 STK32CQ86UX6 486 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 FADS6Q8N9I5 356 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 AGR3Q8TD06 166 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 DEDD2Q8WXF8 326 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PLPPR2Q96GM1 343 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ZNF681Q96N22 645 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 WDFY2Q96P53 400 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ADOQ96SZ5 270 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 SLC30A2Q9BRI3 323 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PINK1Q9BXM7 581 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 C6orf62Q9GZU0 229 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 RACGAP1Q9H0H5 632 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 GABARAPL1Q9H0R8 117 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 FARSBQ9NSD9 589 aaKnown RBP11.73□□□□□ -0.53
HDAC3-213ENST00000492506 CMTM6Q9NX76 183 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ADAM29Q9UKF5 820 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
HDAC3-213ENST00000492506 ALPK2Q86TB3 2170 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 ATP6V1G2-DDX39BF2Z307 99 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 NR5A2O00482 541 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 STX16O14662 325 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 DLX3O60479 287 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 NME6O75414 186 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 REM1O75628 298 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 AQP8O94778 261 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 PPP3CBP16298 524 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 PCSK2P16519 638 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 CSNK2A2P19784 350 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 DSCR4P56555 118 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 CLDN20P56880 219 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 NCS1P62166 190 aa11.72□□□□□ -0.53
HDAC3-213ENST00000492506 RPS4XP62701 263 aaKnown RBP11.72□□□□□ -0.53
HDAC3-213ENST00000492506 LIPEQ05469 1076 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms