RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 C3orf36Q3SXR2 165 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 FAM209AQ5JX71 171 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 C6orf52Q5T4I8 152 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 CYB5R2Q6BCY4 276 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 OGFOD2Q6N063 350 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 PAQR6Q6TCH4 344 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 LRRC74BQ6ZQY2 392 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 WDR31Q8NA23 367 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 POMGNT2Q8NAT1 580 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 OR52N5Q8NH56 324 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 FAM168AQ92567 244 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 ATP6V1G3Q96LB4 118 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 ADAM19Q9H013 955 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 SLC17A5Q9NRA2 495 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 UPB1Q9UBR1 384 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 MARCOQ9UEW3 520 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 OSGIN1Q9UJX0 560 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 FLVCR1Q9Y5Y0 555 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 HEATR5AQ86XA9 2040 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 A0A096LPI6 279 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 TMED7-TICAM2A0A0A6YYA0 188 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 CFAP73A6NFT4 308 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 HMGN4O00479 90 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 TM9SF1O15321 606 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 TSPAN9O75954 239 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 GPIP06744 558 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 RPS4Y1P22090 263 aaKnown RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 USF1P22415 310 aaPredicted RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 S100A3P33764 101 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 NTF4P34130 210 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 RYKP34925 604 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 CHI3L1P36222 383 aaPredicted RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 CHRNEQ04844 493 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 FUT5Q11128 374 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 PDCD4Q53EL6 469 aaKnown RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 GPAT3Q53EU6 434 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 TNFAIP8L2Q6P589 184 aaPredicted RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 C6orf89Q6UWU4 347 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 CCDC103Q8IW40 242 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 GLB1L3Q8NCI6 653 aaPredicted RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 MAGEE2Q8TD90 523 aaPredicted RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 BCAS4Q8TDM0 211 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 WDR60Q8WVS4 1066 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 RAB8BQ92930 207 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 ZG16BQ96DA0 208 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 MNTQ99583 582 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 SLC35A5Q9BS91 424 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 BEX2Q9BXY8 128 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 C8orf4Q9NR00 106 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 THUMPD1Q9NXG2 353 aaKnown RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 NKIRAS2Q9NYR9 191 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 CALML5Q9NZT1 146 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 TMED7Q9Y3B3 224 aa8□□□□□ -1.13
HDAC3-212ENST00000492407 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
HDAC3-212ENST00000492407 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
HDAC3-212ENST00000492407 A0A0G2JPF8 293 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 PRAMEF27A3QJZ7 478 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 AQP7P3A6NL99 342 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 VWC2LB2RUY7 222 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 HNRNPCL3B7ZW38 293 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 E9PBE3 544 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 M0R1B8 84 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 HDAC3O15379 428 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 GPRIN2O60269 458 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 PDE5AO76074 875 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CPSF4O95639 269 aaKnown RBP7.99□□□□□ -1.13
HDAC3-212ENST00000492407 KRT75O95678 551 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 IGHV3-9P01782 118 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 HNRNPCL4P0DMR1 293 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 IL7RP16871 459 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 TACR3P29371 465 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 LSP1P33241 339 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 GZMKP49863 264 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 VBP1P61758 197 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 PLAURQ03405 335 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CHD3Q12873 2000 aaKnown RBP7.99□□□□□ -1.13
HDAC3-212ENST00000492407 EPS8Q12929 822 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 ADRM1Q16186 407 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 SWI5Q1ZZU3 235 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 WDR93Q6P2C0 686 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 KLHL24Q6TFL4 600 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CASP12Q6UXS9 341 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 SPATA19Q7Z5L4 167 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CLEC4FQ8N1N0 589 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 MREGQ8N565 214 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF781Q8N8C0 355 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 OR52E4Q8NGH9 312 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 AENQ8WTP8 325 aaKnown RBP7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CNOT9Q92600 299 aaKnown RBP7.99□□□□□ -1.13
HDAC3-212ENST00000492407 PANX1Q96RD7 426 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 KCNK17Q96T54 332 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 CIB1Q99828 191 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 OR11A1Q9GZK7 315 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 SLC38A1Q9H2H9 487 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 TPK1Q9H3S4 243 aa7.99□□□□□ -1.13
HDAC3-212ENST00000492407 ARMC7Q9H6L4 198 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms