RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PMEPA1Q969W9 287 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 RFT1Q96AA3 541 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 GFI1Q99684 422 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 KCNJ15Q99712 375 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 WDR76Q9H967 626 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 FSCN3Q9NQT6 498 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 NUDT15Q9NV35 164 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF337Q9Y3M9 751 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 EFCAB7A8K855 629 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ZFPL1O95159 310 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 HLA-DQB1P01920 261 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 CD27P26842 260 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ARL4DP49703 201 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 GBX2P52951 348 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-220ENST00000492280 HSD17B7P56937 341 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 CEP78Q5JTW2 689 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 LINC01590Q5TEZ4 76 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 FAM69BQ5VUD6 431 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ATG4DQ86TL0 474 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-220ENST00000492280 JAZF1Q86VZ6 243 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 KDM8Q8N371 416 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 BEST4Q8NFU0 473 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF671Q8TAW3 534 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 AMELYQ99218 206 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 SYT4Q9H2B2 425 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 MMP25Q9NPA2 562 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ICAM5Q9UMF0 924 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 SLC19A2O60779 497 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 MT-ND4P03905 459 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 BTCP35070 178 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 GRK6P43250 576 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 PITPNBP48739 271 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 DIO1P49895 249 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ACTC1P68032 377 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 ACTA1P68133 377 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 EFR3AQ14156 821 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 NSDHLQ15738 373 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 MESTQ5EB52 335 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 OR51A4Q8NGJ6 313 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 RNF170Q96K19 258 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 INPP5EQ9NRR6 644 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 NPAP1Q9NZP6 1156 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 IKZF2Q9UKS7 526 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 NCOR1O75376 2440 aa11.33□□□□□ -0.6
HMGN1-220ENST00000492280 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 FLRT2O43155 660 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF264O43296 627 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 AKR7A2O43488 359 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 EPXP11678 715 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 AHCYP23526 432 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 CENPAP49450 140 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 RPS4XP62701 263 aaKnown RBP11.32□□□□□ -0.6
HMGN1-220ENST00000492280 PLA2G7Q13093 441 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 TDGQ13569 410 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 SF3A2Q15428 464 aaKnown RBP11.32□□□□□ -0.6
HMGN1-220ENST00000492280 CDONQ4KMG0 1287 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 FNDC7Q5VTL7 733 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 MZT2BQ6NZ67 158 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 DPY19L2P2Q6ZN68 376 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 SLC35D2Q76EJ3 337 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 NOXA1Q86UR1 476 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 OR14A16Q8NHC5 309 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 DDOQ99489 341 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 NUDT22Q9BRQ3 303 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 OR11A1Q9GZK7 315 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 ANKRD10Q9NXR5 420 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 HAO2Q9NYQ3 351 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 NKIRAS2Q9NYR9 191 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 ADAM30Q9UKF2 790 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 MKL2Q9ULH7 1088 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-220ENST00000492280 PCDHGB7Q9Y5F8 929 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 DDAH2O95865 285 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 OR2T7P0C7T2 308 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 SRFP11831 508 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 CLDN20P56880 219 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 SKP1P63208 163 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 NANOGNBQ7Z5D8 188 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 SLC35F3Q8IY50 421 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 PM20D2Q8IYS1 436 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 OR2T27Q8NH04 317 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-220ENST00000492280 DACT3Q96B18 629 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-220ENST00000492280 UBQLN4Q9NRR5 601 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 GTF2A1LQ9UNN4 478 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 NUP210LQ5VU65 1888 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
HMGN1-220ENST00000492280 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms