RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.87□□□□□ -2.11
NF1-213ENST00000489712 IGLV4-60A0A075B6I1 120 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 SERTM2A0A1B0GWG4 89 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 E7ESA3 106 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 SPECC1L-ADORA2AF8WAN1 911 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 HAS3O00219 553 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 NBR2O15453 112 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TAPBPO15533 448 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 NPIPB7O75200 414 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CDH16O75309 829 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 DIRAS1O95057 198 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 AP2A1O95782 977 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 F10P00742 488 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 IGHV3-48P01763 117 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 STAG3L3P0CL85 134 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 NCK1P16333 377 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 GCAP28676 217 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 GNA11P29992 359 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 RFC4P35249 363 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 GCKP35557 465 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CTRLP40313 264 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 BTDP43251 543 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 MAGEA1P43355 309 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 P2RY1P47900 373 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CASP4P49662 377 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 C21orf59P57076 290 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 HERVK_113P61574 105 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 PAX5Q02548 391 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 BST2Q10589 180 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 RAB40BQ12829 278 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 NDUFA9Q16795 377 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 HADHQ16836 314 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 SLC5A12Q1EHB4 618 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TRIM16LQ309B1 348 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 XKR7Q5GH72 579 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CYS1Q717R9 158 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 H2BFWTQ7Z2G1 175 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TMCO2Q7Z6W1 182 aaPredicted RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 LUZP2Q86TE4 346 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 BIVMQ86UB2 503 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 SERPINA9Q86WD7 417 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 C17orf82Q86X59 251 aaPredicted RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 PSTKQ8IV42 348 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 COMMD1Q8N668 190 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ATP6V0D2Q8N8Y2 350 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 MFSD9Q8NBP5 474 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 OR6C4Q8NGE1 309 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TCTEX1D2Q8WW35 142 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 MRPS31Q92665 395 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 STMN2Q93045 179 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CXorf40BQ96DE9 158 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TIMD4Q96H15 378 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 SLC38A2Q96QD8 506 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 TMEM121Q9BTD3 319 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 RAB34Q9BZG1 259 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ILKAPQ9H0C8 392 aaPredicted RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 ZNF385DQ9H6B1 395 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ZFP14Q9HCL3 533 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 SH2D2AQ9NP31 389 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 RPRD1BQ9NQG5 326 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 CHRAC1Q9NRG0 131 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 NUDT15Q9NV35 164 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ZNF639Q9UID6 485 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ZNF225Q9UK10 706 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 PRPF19Q9UMS4 504 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 SAMD4AQ9UPU9 718 aaKnown RBP1.87□□□□□ -2.11
NF1-213ENST00000489712 RASD1Q9Y272 281 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 MEMO1Q9Y316 297 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 CHD4Q14839 1912 aa1.87□□□□□ -2.11
NF1-213ENST00000489712 ZNFX1Q9P2E3 1918 aaKnown RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 IQANK1A0A1B0GTG1 560 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 A6NDX4 124 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 FAM166BA8MTA8 275 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 A8MXQ7 604 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 FAM25EA8MYX2 175 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 KRTAP4-16G5E9R7 235 aaPredicted RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 HIP1O00291 1037 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 FOXE1O00358 373 aaPredicted RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 FCN1O00602 326 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 DNALI1O14645 258 aaPredicted RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 RGS16O15492 202 aaPredicted RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 RS1O15537 224 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 DNAJB6O75190 326 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 ATP5LO75964 103 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 CA1P00915 261 aaPredicted RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 INSP01308 110 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 FTH1P02794 183 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 POLR2MP0CAP2 368 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 PABPC4LP0CB38 370 aaKnown RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 ZNF24P17028 368 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 MMP11P24347 488 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 CD1CP29017 333 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 IFNA8P32881 189 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 FDFT1P37268 417 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 PMELP40967 661 aa1.86□□□□□ -2.11
NF1-213ENST00000489712 RPS15P62841 145 aaKnown RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 RPL8P62917 257 aaKnown RBP1.86□□□□□ -2.11
NF1-213ENST00000489712 MERTKQ12866 999 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms