RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 MMP11P24347 488 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 HMGB2P26583 209 aaKnown RBP2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 GCAP28676 217 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 LAP3P28838 519 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 CD1BP29016 333 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 APOC4P55056 127 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 WNT4P56705 351 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 TLE4Q04727 773 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 ARFRP1Q13795 201 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 SLC15A2Q16348 729 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 IL17AQ16552 155 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 CCDC14Q49A88 953 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 CCDC152Q4G0S7 254 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 C2orf83Q53S99 150 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 SLC35F2Q8IXU6 374 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 SLC34A3Q8N130 599 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 C7orf33Q8WU49 177 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 HTR3CQ8WXA8 447 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 EFHD2Q96C19 240 aaPredicted RBP2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 SEC22AQ96IW7 307 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 VCPKMTQ9H867 229 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 RAB18Q9NP72 206 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 ANAPC11Q9NYG5 84 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 PIPOXQ9P0Z9 390 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 NYAP2Q9P242 653 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 RPS6KB2Q9UBS0 482 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 PRPF19Q9UMS4 504 aaKnown RBP2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 COPS3Q9UNS2 423 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 MEMO1Q9Y316 297 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 RYR2Q92736 4967 aa2.43□□□□□ -2.02
AC055855.1-201ENST00000489563 AGLP35573 1532 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 ATP7AQ04656 1500 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 NRXN3Q9Y4C0 1643 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 FRMPD3Q5JV73 1810 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 COL12A1Q99715 3063 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 DIP2CQ9Y2E4 1556 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 PLEKHG1Q9ULL1 1385 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 C15orf38-AP3S2A0A0A6YYH1 394 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 A0A0G2JRQ6 117 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 CPLX1O14810 134 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 POLR2DO15514 142 aaKnown RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 PFKFB2O60825 505 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 MTX2O75431 263 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 SCGNO76038 276 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 ZNF44P15621 663 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 COX5AP20674 150 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 COX7A1P24310 79 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 HTR1FP30939 366 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 CALCRP30988 508 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 RDXP35241 583 aaKnown RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 SELENOTP62341 195 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 SPIBQ01892 262 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 PSG7Q13046 419 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 RIPK1Q13546 671 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 DPYSL2Q16555 572 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 NSUN5P1Q3KNT7 163 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 ANKDD1AQ495B1 522 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 C1orf146Q5VVC0 180 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 GDPD3Q7L5L3 318 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 VSTM4Q8IW00 320 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 FTMTQ8N4E7 242 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 DCAF4L2Q8NA75 395 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 EMG1Q92979 244 aaKnown RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 TRIM44Q96DX7 344 aaPredicted RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 CCNL2Q96S94 520 aaPredicted RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 TBX15Q96SF7 602 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 ZSCAN5AQ9BUG6 496 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 RAB34Q9BZG1 259 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 LRRN3Q9H3W5 708 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 NANOGQ9H9S0 305 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 APMAPQ9HDC9 416 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 UFSP2Q9NUQ7 469 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 C6orf203Q9P0P8 240 aaPredicted RBP2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 CACNA1HO95180 2353 aa2.42□□□□□ -2.02
AC055855.1-201ENST00000489563 RGPD3A6NKT7 1758 aaPredicted RBP2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 RGPD4Q7Z3J3 1758 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 PAPPA2Q9BXP8 1791 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 SAMD9LQ8IVG5 1584 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 USP27XA6NNY8 438 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 IDSB3KWA1 339 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 GPR89AB7ZAQ6 455 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 TRIM49D1C9J1S8 452 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 F5H6K3 240 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 DCTN6O00399 190 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 RGS16O15492 202 aaPredicted RBP2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 UGT1A9O60656 530 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 AP2A1O95782 977 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 P04436 131 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 GPR89BP0CG08 455 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 RFC4P35249 363 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 RPL13AP40429 203 aaKnown RBP2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 PKNOX1P55347 436 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 KLRC3Q07444 240 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 FGL1Q08830 312 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 C1orf61Q13536 156 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 NSDHLQ15738 373 aa2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 LRRC23Q53EV4 343 aaPredicted RBP2.41□□□□□ -2.02
AC055855.1-201ENST00000489563 KLF17Q5JT82 389 aaPredicted RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms