RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SPRYD4Q8WW59 207 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 THRSPQ92748 146 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF501Q96CX3 271 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ERMAPQ96PL5 475 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SNX18Q96RF0 628 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 UBL7Q96S82 380 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CNN2Q99439 309 aaKnown RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 TTYH2Q9BSA4 534 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 KATNB1Q9BVA0 655 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 NMNAT2Q9BZQ4 307 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 RNF167Q9H6Y7 350 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 FKRPQ9H9S5 495 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ADGRL4Q9HBW9 690 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ABCB10Q9NRK6 738 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SNTG1Q9NSN8 517 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 PLEKHB1Q9UF11 243 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 IL20RAQ9UHF4 553 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF229Q9UJW7 825 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 PPIEQ9UNP9 301 aaKnown RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 MSRB2Q9Y3D2 182 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 GRIP1Q9Y3R0 1128 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 TMEM184BQ9Y519 407 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 V9GYH0 126 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TRAV27A0A087WT01 109 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 A0A096LPE4 126 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 A0A1W2PPZ6 126 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CPED1A4D0V7 1026 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 GTPBP1O00178 669 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 HRKO00198 91 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SOCS6O14544 535 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CTDSP2O14595 271 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CASKO14936 926 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 MAGEB3O15480 346 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 RNF13O43567 381 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TSPAN2O60636 221 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ADAM11O75078 769 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SC5DO75845 299 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 GATBO75879 557 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ARL6IP5O75915 188 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SLC2A10O95528 541 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 PPP1R3DO95685 299 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 HLA-DQB1P01920 261 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 NAGAP17050 411 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 FUT1P19526 365 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 PGCP20142 388 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 EPHA1P21709 976 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 IL12BP29460 328 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 RANBP1P43487 201 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 HTR3AP46098 478 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 RFX3P48380 749 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 DIO1P49895 249 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 BLVRAP53004 296 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SUMO3P55854 103 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 NRG3P56975 720 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OR1D5P58170 312 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 RPS7P62081 194 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CCL7P80098 99 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 HNRNPA0Q13151 305 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 EFR3AQ14156 821 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 EBPQ15125 230 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF74Q16587 644 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 GLYR1Q49A26 553 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CDONQ4KMG0 1287 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CCDC157Q569K6 752 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SNAP47Q5SQN1 464 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ARHGAP40Q5TG30 622 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SLC6A19Q695T7 634 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ZNF574Q6ZN55 896 aaPredicted RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TMPRSS9Q7Z410 1059 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 MEX3DQ86XN8 651 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 POC5Q8NA72 575 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 BBS1Q8NFJ9 593 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OR4D9Q8NGE8 314 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OR8K3Q8NH51 312 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OR5W2Q8NH69 310 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OR1L3Q8NH93 324 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ASB15Q8WXK1 588 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SMPDL3BQ92485 455 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 OTULINQ96BN8 352 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 ARSGQ96EG1 525 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TRMT61AQ96FX7 289 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TXNDC15Q96J42 360 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 CMTM3Q96MX0 182 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 TNFRSF13CQ96RJ3 184 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 KCNS3Q9BQ31 491 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 NEURL2Q9BR09 285 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 MRI1Q9BV20 369 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 SRRQ9GZT4 340 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 LRRN3Q9H3W5 708 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 FGF21Q9NSA1 209 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 RHBDL2Q9NX52 303 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 DKK4Q9UBT3 224 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 NPFFR2Q9Y5X5 522 aa7.7□□□□□ -1.18
VTI1A-207ENST00000489357 MAP1BP46821 2468 aaKnown RBP7.7□□□□□ -1.18
VTI1A-207ENST00000489357 IGF2RP11717 2491 aa7.69□□□□□ -1.18
VTI1A-207ENST00000489357 TRAV1-2A0A0B4J238 106 aa7.69□□□□□ -1.18
VTI1A-207ENST00000489357 A0A1W2PNU3 283 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-207ENST00000489357 A0A1W2PQL4 384 aaPredicted RBP7.69□□□□□ -1.18
VTI1A-207ENST00000489357 FABP12A6NFH5 140 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms