RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLAMF7Q9NQ25 335 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 C19orf12Q9NSK7 152 aa16.33■□□□□ 0.2
NPHP4-209ENST00000489180 PUS1Q9Y606 427 aaKnown RBP eCLIP16.33■□□□□ 0.2
NPHP4-209ENST00000489180 A0A0D9SG52 128 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 LOC102725191A0A1B0GVB3 256 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 P2RY10O00398 339 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SIX6O95475 246 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 CBX7O95931 251 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PLA2G7Q13093 441 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 LTC4SQ16873 150 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SYT6Q5T7P8 510 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-209ENST00000489180 RFPL4BQ6ZWI9 263 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MRPL43Q8N983 215 aaKnown RBP16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MCTS1Q9ULC4 181 aaKnown RBP16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SERINC4A6NH21 518 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 TRAPPC2LH3BP13 241 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 REEP5Q00765 189 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 FAM78AQ5JUQ0 283 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 WDSUB1Q8N9V3 476 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 METTL9Q9H1A3 318 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PPT2Q9UMR5 302 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SLC22A7Q9Y694 548 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 GFRA2O00451 464 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PKLRP30613 574 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 CLDN17P56750 224 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 NR0B2Q15466 257 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 Q499Y3 187 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 NEURL3Q96EH8 262 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 LIN7BQ9HAP6 207 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 C17orf113A0A1B0GUU1 675 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SELENOFO60613 162 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF780AO75290 641 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ARNTP27540 789 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 TAS2R46P59540 309 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MKXQ8IYA7 352 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF454Q8N9F8 522 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF511Q8NB15 262 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PFN4Q8NHR9 129 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 RAB3CQ96E17 227 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 SEC22CQ9BRL7 303 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 C20orf85Q9H1P6 137 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 EMC9Q9Y3B6 208 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 A0A1B0GWA3 101 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 A0A1W2PPV4 95 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 H3BNC9 293 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 CR2P20023 1033 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 OR52W1Q6IF63 320 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF836Q6ZNA1 936 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MMP21Q8N119 569 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PSD2Q9BQI7 771 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 HS3ST2Q9Y278 367 aa16.32■□□□□ 0.2
NPHP4-209ENST00000489180 PMP2P02689 132 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 GJA4P35212 333 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 SLC36A2Q495M3 483 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 RASD2Q96D21 266 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 MBOAT4Q96T53 435 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 MAP3K3Q99759 626 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 FKRPQ9H9S5 495 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 SLC43A1O75387 559 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 SCGB2A1O75556 95 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 UBL3O95164 117 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 HTR5AP47898 357 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 MTCP1P56278 107 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 RPP30P78346 268 aaKnown RBP16.31■□□□□ 0.2
NPHP4-209ENST00000489180 ARG2P78540 354 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 LRRC26Q2I0M4 334 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 YIF1BQ5BJH7 314 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 WFDC5Q8TCV5 224 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 RHBDD1Q8TEB9 315 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 ARPC5LQ9BPX5 153 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF286AQ9HBT8 521 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 LTB4R2Q9NPC1 389 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 ZC3H12DA2A288 527 aaKnown RBP16.31■□□□□ 0.2
NPHP4-209ENST00000489180 OR7C1O76099 320 aaPredicted RBP16.31■□□□□ 0.2
NPHP4-209ENST00000489180 CTU2Q2VPK5 515 aaKnown RBP16.31■□□□□ 0.2
NPHP4-209ENST00000489180 HEPHL1Q6MZM0 1159 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 DLEU7Q6UYE1 221 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
NPHP4-209ENST00000489180 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 TMEM59Q9BXS4 323 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 OBP2BQ9NPH6 170 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 SRPK3Q9UPE1 567 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 B4GALT3O60512 393 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 NXPH3O95157 252 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 SF3B4Q15427 424 aaKnown RBP eCLIP16.31■□□□□ 0.25e-8■■■■□ 21.4
NPHP4-209ENST00000489180 CHTF18Q8WVB6 975 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 BORCS7Q96B45 105 aa16.31■□□□□ 0.2
NPHP4-209ENST00000489180 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 HIST2H3PS2Q5TEC6 136 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 WWTR1Q9GZV5 400 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 WDR76Q9H967 626 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 PRMT8Q9NR22 394 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-209ENST00000489180 MRPS28Q9Y2Q9 187 aaKnown RBP16.3■□□□□ 0.2
NPHP4-209ENST00000489180 RFXAPO00287 272 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 GNB3P16520 340 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 MMP11P24347 488 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms